Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZGR
DownloadVisualize
BU of 2zgr by Molmil
Crystal structure of AAL mutant L33A in C2 spacegroup
Descriptor: Anti-tumor lectin
Authors:Yang, N, Li, D.F, Wang, D.C.
Deposit date:2008-01-23
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
2ZGS
DownloadVisualize
BU of 2zgs by Molmil
Crystal structure of Agrocybe aegerita lectin AAL mutant L47A
Descriptor: Anti-tumor lectin
Authors:Li, D.F, Yang, N, Wang, D.C.
Deposit date:2008-01-23
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
6M53
DownloadVisualize
BU of 6m53 by Molmil
Crystal structure of 2, 3-dihydroxybenzoic acid decarboxylase from Fusarium oxysporum
Descriptor: 2,3-dihydroxybenzoate decarboxylase, GLYCEROL, ZINC ION
Authors:Song, M.K, Feng, J.H, Liu, W.D, Wu, Q.Q, Zhu, D.M.
Deposit date:2020-03-09
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:2,3-Dihydroxybenzoic Acid Decarboxylase from Fusarium oxysporum: Crystal Structures and Substrate Recognition Mechanism.
Chembiochem, 21, 2020
7YJ1
DownloadVisualize
BU of 7yj1 by Molmil
Cryo-EM structure of SPT-ORMDL3 (ORMDL3-deltaN2) complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-19
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7YJ2
DownloadVisualize
BU of 7yj2 by Molmil
Cryo-EM structure of SPT-ORMDL3 (ORMDL3-N13A) complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-19
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7YIU
DownloadVisualize
BU of 7yiu by Molmil
Cryo-EM structure of the C6-ceramide-bound SPT-ORMDL3 complex
Descriptor: HEXADECANE, N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)HEXANAMIDE, ORM1-like protein 3, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-18
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7YIY
DownloadVisualize
BU of 7yiy by Molmil
Cryo-EM structure of SPT-ORMDL3 complex
Descriptor: N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-18
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
5Z9T
DownloadVisualize
BU of 5z9t by Molmil
a new PL6 alginate lyase complex with trisaccharide
Descriptor: GLYCEROL, MALONATE ION, SODIUM ION, ...
Authors:Liu, W.Z, Lyu, Q.Q, Zhang, K.K, Li, Z.J.
Deposit date:2018-02-05
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
6A40
DownloadVisualize
BU of 6a40 by Molmil
complex structure of Alginate lyase AlyF-OU02 with G4
Descriptor: alginate lyase AlyF-OU02, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid
Authors:Liu, W.Z, Lyu, Q.Q, Zhang, K.K.
Deposit date:2018-06-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
6A92
DownloadVisualize
BU of 6a92 by Molmil
Crystal structure of a cyclase Filc1 from Fischerella sp.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, TETRAETHYLENE GLYCOL, ...
Authors:Hu, X.Y, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-07-11
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The Crystal Structure of a Class of Cyclases that Catalyze the Cope Rearrangement
Angew. Chem. Int. Ed. Engl., 57, 2018
6ITG
DownloadVisualize
BU of 6itg by Molmil
a new alginate lyase (PL6) from Vibrio splendidus OU02
Descriptor: Alginate lyase, GLYCEROL, MALONATE ION
Authors:Liu, W.Z, Lyu, Q.Q.
Deposit date:2018-11-23
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
5ZXA
DownloadVisualize
BU of 5zxa by Molmil
Crystal structure of fibronectin-binding protein Apa mutant from Mycobacterium tuberculosis
Descriptor: Alanine and proline-rich secreted protein Apa, GLYCEROL, MERCURY (II) ION
Authors:Gao, J, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-05-18
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Functional and structural investigations of fibronectin-binding protein Apa from Mycobacterium tuberculosis.
Biochim Biophys Acta Gen Subj, 1863, 2019
5ZX9
DownloadVisualize
BU of 5zx9 by Molmil
Crystal structure of apo form fibronectin-binding protein Apa from Mycobacterium tuberculosis
Descriptor: Alanine and proline-rich secreted protein Apa, GLYCEROL
Authors:Gao, J, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-05-18
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Functional and structural investigations of fibronectin-binding protein Apa from Mycobacterium tuberculosis.
Biochim Biophys Acta Gen Subj, 1863, 2019
6A9F
DownloadVisualize
BU of 6a9f by Molmil
Crystal structure of a cyclase from Fischerella sp. TAU in complex with 4-(1H-Indol-3-yl)butan-2-one
Descriptor: 4-(1~{H}-indol-3-yl)butan-2-one, CALCIUM ION, GLYCEROL, ...
Authors:Hu, X.Y, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-07-13
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of a Class of Cyclases that Catalyze the Cope Rearrangement
Angew. Chem. Int. Ed. Engl., 57, 2018
6A99
DownloadVisualize
BU of 6a99 by Molmil
Crystal structure of a Stig cyclases Fisc from Fischerella sp. TAU in complex with (3Z)-3-(1-methyl-2-pyrrolidinylidene)-3H-indole
Descriptor: (3~{Z})-3-(1-methylpyrrolidin-2-ylidene)indole, CALCIUM ION, MAGNESIUM ION, ...
Authors:Hu, X.Y, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-07-12
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:The Crystal Structure of a Class of Cyclases that Catalyze the Cope Rearrangement
Angew. Chem. Int. Ed. Engl., 57, 2018
6ADU
DownloadVisualize
BU of 6adu by Molmil
Crystal structure of an enzyme in complex with ligand C
Descriptor: (3~{Z})-3-(1-methylpyrrolidin-2-ylidene)indole, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Tan, X.K, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-08-02
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The Crystal Structure of a Class of Cyclases that Catalyze the Cope Rearrangement.
Angew.Chem.Int.Ed.Engl., 57, 2018
8W88
DownloadVisualize
BU of 8w88 by Molmil
Cryo-EM structure of the SEP363856-bound TAAR1-Gs complex
Descriptor: 1-[(7~{S})-5,7-dihydro-4~{H}-thieno[2,3-c]pyran-7-yl]-~{N}-methyl-methanamine, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Liu, H, Zheng, Y, Wang, Y, Wang, Y, He, X, Xu, P, Huang, S, Yuan, Q, Zhang, X, Wang, S, Xu, H.E, Xu, F.
Deposit date:2023-09-01
Release date:2023-11-22
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Recognition of methamphetamine and other amines by trace amine receptor TAAR1.
Nature, 624, 2023
8W8B
DownloadVisualize
BU of 8w8b by Molmil
Cryo-EM structure of SEP-363856 bounded serotonin 1A (5-HT1A) receptor-Gi protein complex
Descriptor: 1-[(7~{S})-5,7-dihydro-4~{H}-thieno[2,3-c]pyran-7-yl]-~{N}-methyl-methanamine, Antibody fragment scFv16, CHOLESTEROL, ...
Authors:Liu, H, Zheng, Y, Wang, Y, Wang, Y, He, X, Xu, P, Huang, S, Yuan, Q, Zhang, X, Wang, S, Xu, H.E, Xu, F.
Deposit date:2023-09-01
Release date:2023-11-22
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Recognition of methamphetamine and other amines by trace amine receptor TAAR1.
Nature, 624, 2023
8W87
DownloadVisualize
BU of 8w87 by Molmil
Cryo-EM structure of the METH-TAAR1 complex
Descriptor: (2S)-N-methyl-1-phenylpropan-2-amine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Liu, H, Zheng, Y, Wang, Y, Wang, Y, He, X, Xu, P, Huang, S, Yuan, Q, Zhang, X, Wang, S, Xu, H.E, Xu, F.
Deposit date:2023-09-01
Release date:2023-11-22
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Recognition of methamphetamine and other amines by trace amine receptor TAAR1.
Nature, 624, 2023
8W8A
DownloadVisualize
BU of 8w8a by Molmil
Cryo-EM structure of the RO5256390-TAAR1 complex
Descriptor: (4S)-4-[(2S)-2-phenylbutyl]-1,3-oxazolidin-2-imine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Liu, H, Zheng, Y, Wang, Y, Wang, Y, He, X, Xu, P, Huang, S, Yuan, Q, Zhang, X, Wang, S, Xu, H.E, Xu, F.
Deposit date:2023-09-01
Release date:2023-11-22
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Recognition of methamphetamine and other amines by trace amine receptor TAAR1.
Nature, 624, 2023
8W89
DownloadVisualize
BU of 8w89 by Molmil
Cryo-EM structure of the PEA-bound TAAR1-Gs complex
Descriptor: 2-PHENYLETHYLAMINE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Liu, H, Zheng, Y, Wang, Y, Wang, Y, He, X, Xu, P, Huang, S, Yuan, Q, Zhang, X, Wang, S, Xu, H.E, Xu, F.
Deposit date:2023-09-01
Release date:2023-11-22
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Recognition of methamphetamine and other amines by trace amine receptor TAAR1.
Nature, 624, 2023
6KA2
DownloadVisualize
BU of 6ka2 by Molmil
Crystal structure of a Thebaine synthase from Papaver somniferum in complex with TBN
Descriptor: (4R,7aR,12bS)-7,9-dimethoxy-3-methyl-2,4,7a,13-tetrahydro-1H-4,12-methanobenzofuro[3,2-e]isoquinoline, Thebaine synthase 2
Authors:Xue, J, Yu, X.J, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-06-20
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into thebaine synthase 2 catalysis.
Biochem.Biophys.Res.Commun., 529, 2020
6KA3
DownloadVisualize
BU of 6ka3 by Molmil
Crystal structure of a Thebaine synthase from Papaver somniferum
Descriptor: PALMITIC ACID, SULFATE ION, Thebaine synthase 2
Authors:Xue, J, Yu, X.J, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-06-20
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Structural insights into thebaine synthase 2 catalysis.
Biochem.Biophys.Res.Commun., 529, 2020
6IHI
DownloadVisualize
BU of 6ihi by Molmil
Crystal structure of RasADH 3B3/I91V from Ralstonia.sp in complex with NADPH and A6O
Descriptor: (2R,3S)-2-ethyl-2-[(2E)-2-(6-methoxy-3,4-dihydro-2H-naphthalen-1-ylidene)ethyl]-3-oxidanyl-cyclopentan-1-one, Alclohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, H.L, Chen, X, Liu, W.D, Wu, Q.Q, Zhu, D.M.
Deposit date:2018-09-30
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Efficient reductive desymmetrization of bulky 1,3-cyclodiketones enabled by structure-guided directed evolution of a carbonyl reductase.
Nat Catal, 2, 2019
6IHH
DownloadVisualize
BU of 6ihh by Molmil
Crystal structure of RasADH F12 from Ralstonia.sp in complex with NADPH and A6O
Descriptor: (2R,3S)-2-ethyl-2-[(2E)-2-(6-methoxy-3,4-dihydro-2H-naphthalen-1-ylidene)ethyl]-3-oxidanyl-cyclopentan-1-one, Alclohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, H.L, Chen, X, Liu, W.D, Wu, Q.Q, Zhu, D.M.
Deposit date:2018-09-30
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Efficient reductive desymmetrization of bulky 1,3-cyclodiketones enabled by structure-guided directed evolution of a carbonyl reductase.
Nat Catal, 2, 2019

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon