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2QVC
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BU of 2qvc by Molmil
Crystal structure of a periplasmic sugar ABC transporter from Thermotoga maritima
Descriptor: Sugar ABC transporter, periplasmic sugar-binding protein, beta-D-glucopyranose
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-08
Release date:2007-08-28
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a periplasmic glucose-binding protein from Thermotoga maritima.
Acta Crystallogr.,Sect.F, 68, 2012
2QZJ
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BU of 2qzj by Molmil
Crystal structure of a two-component response regulator from Clostridium difficile
Descriptor: Two-component response regulator
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-16
Release date:2007-09-04
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal structure of a two-component response regulator from Clostridium difficile.
To be Published
2OQH
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BU of 2oqh by Molmil
Crystal structure of an isomerase from Streptomyces coelicolor A3(2)
Descriptor: Putative isomerase, SULFATE ION
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-31
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of an isomerase from Streptomyces coelicolor
To be Published
2P0L
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BU of 2p0l by Molmil
Crystal structure of a Lipoate-protein ligase A
Descriptor: Lipoate-protein ligase A
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-28
Release date:2007-03-20
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of a Lipoate-protein ligase A
To be Published
2OY9
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BU of 2oy9 by Molmil
Crystal structure of an unknown conserved protein- Pfam: UPF0223
Descriptor: MAGNESIUM ION, UPF0223 protein BH2638
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-21
Release date:2007-03-20
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of an unknown conserved protein - Pfam: UPF0223
To be Published
2PGW
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BU of 2pgw by Molmil
Crystal structure of a putative muconate cycloisomerase from Sinorhizobium meliloti 1021
Descriptor: GLYCEROL, Muconate cycloisomerase
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-04-10
Release date:2007-04-24
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a putative muconate cycloisomerase from Sinorhizobium meliloti 1021
To be Published
2Q07
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BU of 2q07 by Molmil
Crystal structure of AF0587, a protein of unknown function
Descriptor: Uncharacterized protein AF0587
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-05-21
Release date:2007-06-05
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of AF0587, a protein of unknown function.
To be Published
2OOD
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BU of 2ood by Molmil
Crystal structure of guanine deaminase from Bradyrhizobium japonicum
Descriptor: Blr3880 protein, GUANINE, ZINC ION
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-25
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of guanine deaminase from Bradyrhizobium japonicum
To be Published
2OPJ
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BU of 2opj by Molmil
Crystal structure of O-succinylbenzoate synthase
Descriptor: O-succinylbenzoate-CoA synthase
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-29
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of O-succinylbenzoate synthase
To be Published
2QGO
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BU of 2qgo by Molmil
Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus acidophilus
Descriptor: Putative Fe-S biosynthesis protein
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-06-29
Release date:2007-07-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural analysis of Fe-S cluster proteins.
To be Published
2QH0
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BU of 2qh0 by Molmil
Crystal structure of a glyoxalase from clostridium acetobutylicum
Descriptor: Lactoylglutathione lyase, ZINC ION
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-06-29
Release date:2007-07-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of a glyoxalase from clostridium acetobutylicum.
To be Published
2P2E
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BU of 2p2e by Molmil
Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus salivarius with novel protein fold
Descriptor: Putative Fe-S biosynthesis protein
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-07
Release date:2007-03-20
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus salivarius with novel protein fold
To be Published
2QVH
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BU of 2qvh by Molmil
Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate (OSB)
Descriptor: 2-SUCCINYLBENZOATE, MAGNESIUM ION, O-succinylbenzoate-CoA synthase
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-08
Release date:2007-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate.
To be Published
2QXY
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BU of 2qxy by Molmil
Crystal structure of a response regulator from Thermotoga maritima
Descriptor: Response regulator, SULFATE ION
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-13
Release date:2007-08-28
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a response regulator from Thermotoga maritima.
To be Published
7TLT
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BU of 7tlt by Molmil
SARS-CoV-2 Spike-derived peptide S489-497 (YFPLQSYGF) presented by HLA-A*29:02
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A alpha chain, ...
Authors:Murdolo, L.D, Szeto, C, Gras, S.
Deposit date:2022-01-18
Release date:2022-10-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ablation of CD8 + T cell recognition of an immunodominant epitope in SARS-CoV-2 Omicron variants BA.1, BA.2 and BA.3.
Nat Commun, 13, 2022
8GOD
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BU of 8god by Molmil
Co-crystal structure of Human Protein-arginine deiminase type-4 (PAD4) with small molecule inhibitor JBI-589
Descriptor: Protein-arginine deiminase type-4, [(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanone
Authors:Swaminathan, S, Birudukota, S, Vaithilingam, K, Kandan, S, Asaithambi, K, Kathiresan, N, Gosu, R, Rajagopal, S, Sadhu, N.
Deposit date:2022-08-24
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Alleviation of arthritis through prevention of neutrophil extracellular traps by an orally available inhibitor of protein arginine deiminase 4.
Sci Rep, 13, 2023
6V2F
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BU of 6v2f by Molmil
Crystal structure of the HIV capsid hexamer bound to the small molecule long-acting inhibitor, GS-6207
Descriptor: HIV-1 capsid, N-[(1S)-1-(3-{4-chloro-3-[(methylsulfonyl)amino]-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl}-6-[3-methyl-3-(methylsulfonyl)but-1-yn-1-yl]pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide
Authors:Appleby, T.C, Link, J.O, Yant, S.R, Villasenor, A.G, Somoza, J.R, Hu, E.Y, Schroeder, S.D, Cihlar, T.
Deposit date:2019-11-22
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Clinical targeting of HIV capsid protein with a long-acting small molecule.
Nature, 584, 2020
1KHI
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BU of 1khi by Molmil
CRYSTAL STRUCTURE OF HEX1
Descriptor: Hex1
Authors:Yuan, P, Swaminathan, K.
Deposit date:2001-11-30
Release date:2002-11-30
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A HEX-1 crystal lattice required for Woronin body function in Neurospora crassa
NAT.STRUCT.BIOL., 10, 2003
1PVD
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BU of 1pvd by Molmil
CRYSTAL STRUCTURE OF THE THIAMIN DIPHOSPHATE DEPENDENT ENZYME PYRUVATE DECARBOXYLASE FROM THE YEAST SACCHAROMYCES CEREVISIAE AT 2.3 ANGSTROMS RESOLUTION
Descriptor: MAGNESIUM ION, PYRUVATE DECARBOXYLASE, THIAMINE DIPHOSPHATE
Authors:Furey, W, Arjunan, P.
Deposit date:1995-04-20
Release date:1995-07-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution.
J.Mol.Biol., 256, 1996
1PYD
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BU of 1pyd by Molmil
CATALYTIC CENTERS IN THE THIAMIN DIPHOSPHATE DEPENDENT ENZYME PYRUVATE DECARBOXYLASE AT 2.4 ANGSTROMS RESOLUTION
Descriptor: MAGNESIUM ION, PYRUVATE DECARBOXYLASE, THIAMINE DIPHOSPHATE
Authors:Furey, W, Dyda, F.
Deposit date:1993-03-23
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Catalytic centers in the thiamin diphosphate dependent enzyme pyruvate decarboxylase at 2.4-A resolution.
Biochemistry, 32, 1993
7LGD
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BU of 7lgd by Molmil
HLA-B*07:02 in complex with SARS-CoV-2 nucleocapsid peptide N105-113
Descriptor: Beta-2-microglobulin, CHLORIDE ION, HLA class I histocompatibility antigen, ...
Authors:Gras, S, Szeto, C, Chatzileontiadou, D.S.M.
Deposit date:2021-01-20
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:CD8 + T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses.
Immunity, 54, 2021
7LGT
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BU of 7lgt by Molmil
HLA-B*07:02 in complex with 229E-derived coronavirus nucleocapsid peptide N75-83
Descriptor: BROMIDE ION, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Gras, S, Szeto, C, Chatzileontiadou, D.S.M.
Deposit date:2021-01-21
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:CD8 + T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses.
Immunity, 54, 2021
8TU6
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BU of 8tu6 by Molmil
CryoEM structure of PI3Kalpha
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Valverde, R, Shi, H, Holliday, M.
Deposit date:2023-08-15
Release date:2023-11-15
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TSB
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BU of 8tsb by Molmil
Human PI3K p85alpha/p110alpha bound to compound 2
Descriptor: 5-(3-bromo-5-fluorobenzamido)-N-methyl-6-(2-methylanilino)pyridine-3-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024
8TSA
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BU of 8tsa by Molmil
Human PI3K p85alpha/p110alpha H1047R bound to compound 2
Descriptor: 5-(3-bromo-5-fluorobenzamido)-N-methyl-6-(2-methylanilino)pyridine-3-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Holliday, M, Tang, Y, Bulku, A, Wilbur, J, Fraser, J, Valverde, R.
Deposit date:2023-08-11
Release date:2023-11-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Discovery and Clinical Proof-of-Concept of RLY-2608, a First-in-Class Mutant-Selective Allosteric PI3K alpha Inhibitor That Decouples Antitumor Activity from Hyperinsulinemia.
Cancer Discov, 14, 2024

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