Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2FY1
DownloadVisualize
BU of 2fy1 by Molmil
A dual mode of RNA recognition by the RBMY protein
Descriptor: RNA-binding motif protein, Y chromosome, family 1 member A1, ...
Authors:Skrisovska, L, Bourgois, C, Stefl, R, Kister, L, Wenter, P, Elliot, D, Stevenin, J, Allain, F.H.T.
Deposit date:2006-02-07
Release date:2007-02-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The testis-specific human protein RBMY recognizes RNA through a novel mode of interaction.
EMBO Rep., 8, 2007
2KVI
DownloadVisualize
BU of 2kvi by Molmil
Structure of Nab3 RRM
Descriptor: Nuclear polyadenylated RNA-binding protein 3
Authors:Pergoli, R, Kubicek, K, Hobor, F, Pasulka, J, Stefl, R.
Deposit date:2010-03-15
Release date:2010-11-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and RNA-binding study of RNA-recognition motif of Nab3
J.Biol.Chem., 2010
2LLI
DownloadVisualize
BU of 2lli by Molmil
Low resolution structure of RNA-binding subunit of the TRAMP complex
Descriptor: Protein AIR2, ZINC ION
Authors:Holub, P, Lalakova, J, Cerna, H, Sarazova, M, Pasulka, J, Hrazdilova, K, Arce, M.S, Stefl, R, Vanacova, S.
Deposit date:2011-11-10
Release date:2012-03-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation.
Nucleic Acids Res., 40, 2012
2M8H
DownloadVisualize
BU of 2m8h by Molmil
RRM domain of human RBM7
Descriptor: RNA-binding protein 7
Authors:Sikorsky, T, Hrossova, D, Vanacova, S, Stefl, R.
Deposit date:2013-05-21
Release date:2015-01-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:RNA binding properties of the human NEXT complex
To be Published
2M88
DownloadVisualize
BU of 2m88 by Molmil
NMR structure of a two-domain RNA-binding fragment of Nrd1
Descriptor: Protein NRD1
Authors:Bacikova, V, Pasulka, J, Kubicek, K, Stefl, R.
Deposit date:2013-05-08
Release date:2014-05-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and semi-sequence-specific RNA binding of Nrd1.
Nucleic Acids Res., 42, 2014
2LO6
DownloadVisualize
BU of 2lo6 by Molmil
Structure of Nrd1 CID bound to phosphorylated RNAP II CTD
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Protein NRD1
Authors:Kubicek, K, Cerna, H, Pasulka, J, Holub, P, Hrossova, D, Loehr, F, Hofr, C, Vanacova, S, Stefl, R.
Deposit date:2012-01-17
Release date:2012-12-26
Method:SOLUTION NMR
Cite:Serine phosphorylation and proline isomerization in RNAP II CTD control recruitment of Nrd1.
Genes Dev., 26, 2012
2MOW
DownloadVisualize
BU of 2mow by Molmil
Structure of Nrd1p CID - Trf4p NIM complex
Descriptor: Poly(A) RNA polymerase protein 2, Protein NRD1
Authors:Kabzinski, T, Stefl, R, Kubicek, K.
Deposit date:2014-05-06
Release date:2014-08-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular Basis for Coordinating Transcription Termination with Noncoding RNA Degradation.
Mol.Cell, 55, 2014
6IC8
DownloadVisualize
BU of 6ic8 by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2
Descriptor: PHD finger protein 3, TYR-SEP-PRO-THR-SER-PRO-SER-TYR-SEP-PRO-THR
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-02
Release date:2020-07-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.929 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6Q2V
DownloadVisualize
BU of 6q2v by Molmil
Crystal structure of SPOC domain of human PHD-finger protein 3 (PHF3)
Descriptor: GLYCEROL, PHD finger protein 3
Authors:Grishkovskaya, I, Slade, D, Djinovic-Carugo, K.
Deposit date:2018-12-03
Release date:2020-07-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6Q5Y
DownloadVisualize
BU of 6q5y by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser5
Descriptor: PHD finger protein 3, pSer2pSer5
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-09
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6IC9
DownloadVisualize
BU of 6ic9 by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser7
Descriptor: PHD finger protein 3, TYR-SEP-PRO-THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER-PRO
Authors:Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
Deposit date:2018-12-03
Release date:2020-07-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.748 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
2ESE
DownloadVisualize
BU of 2ese by Molmil
Structure of the SAM domain of Vts1p in complex with RNA
Descriptor: 5'-R(*GP*GP*AP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*UP*CP*C)-3', Vts1p
Authors:Allain, F.H.T.
Deposit date:2005-10-26
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2ES5
DownloadVisualize
BU of 2es5 by Molmil
Structure of the SRE RNA
Descriptor: 5'-R(*GP*GP*AP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*UP*CP*C)-3'
Authors:Allain, F.H.T.
Deposit date:2005-10-25
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2ES6
DownloadVisualize
BU of 2es6 by Molmil
Structure of the SAM domain of Vts1p
Descriptor: Vts1p
Authors:Allain, F.H.T.
Deposit date:2005-10-25
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2LTO
DownloadVisualize
BU of 2lto by Molmil
TDRD3 complex
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Tudor domain-containing protein 3
Authors:Sikorsky, T.
Deposit date:2012-05-30
Release date:2013-01-16
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Recognition of asymmetrically dimethylated arginine by TDRD3.
Nucleic Acids Res., 40, 2012
<12

 

221371

PDB entries from 2024-06-19

PDB statisticsPDBj update infoContact PDBjnumon