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4H4P
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BU of 4h4p by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175Q/Q177K mutant (oxidized form)
Descriptor: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
Authors:Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
Deposit date:2012-09-18
Release date:2013-10-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4X
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BU of 4h4x by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175A/T176R/Q177G mutant (oxidized form)
Descriptor: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
Authors:Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
Deposit date:2012-09-18
Release date:2013-10-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
7XTL
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BU of 7xtl by Molmil
Crystal structure of the C-terminal domain of human N-acetylglucosaminyltransferase IVa
Descriptor: Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A soluble form
Authors:Miyazaki, T, Oka, N, Mori, S.
Deposit date:2022-05-17
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family.
Glycobiology, 32, 2022
3VPE
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BU of 3vpe by Molmil
Crystal Structure of Metallo-beta-Lactamase SMB-1
Descriptor: ACETATE ION, GLYCEROL, Metallo-beta-lactamase, ...
Authors:Wachino, J, Yamaguchi, Y, Mori, S, Arakawa, Y, Shibayama, K.
Deposit date:2012-02-29
Release date:2013-02-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insights into the Subclass B3 Metallo-beta-Lactamase SMB-1 and the Mode of Inhibition by the Common Metallo- -Lactamase Inhibitor Mercaptoacetate
Antimicrob.Agents Chemother., 57, 2013
3VQZ
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BU of 3vqz by Molmil
Crystal structure of metallo-beta-lactamase, SMB-1, in a complex with mercaptoacetic acid
Descriptor: Metallo-beta-lactamase, SODIUM ION, SULFANYLACETIC ACID, ...
Authors:Wachino, J, Yamaguchi, Y, Mori, S, Arakawa, Y, Shibayama, K.
Deposit date:2012-04-02
Release date:2013-02-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights into the Subclass B3 Metallo-beta-Lactamase SMB-1 and the Mode of Inhibition by the Common Metallo- -Lactamase Inhibitor Mercaptoacetate
Antimicrob.Agents Chemother., 57, 2013
6BZQ
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BU of 6bzq by Molmil
Crystal structure of halogenase PltM in complex with FAD
Descriptor: BROMIDE ION, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-25
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZZ
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BU of 6bzz by Molmil
Crystal structure of halogenase PltM in complex with partially bound FAD
Descriptor: CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, Halogenase PltM
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-26
Release date:2019-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZA
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BU of 6bza by Molmil
Crystal structure of halogenase PltM in complex with phloroglucinol and FAD
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Halogenase PltM, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-22
Release date:2019-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZT
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BU of 6bzt by Molmil
Crystal structure of halogenase PltM L111Y mutant in complex with FAD
Descriptor: BROMIDE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-26
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZN
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BU of 6bzn by Molmil
Crystal structure of halogenase PltM
Descriptor: CALCIUM ION, GLYCEROL, Halogenase PltM
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-25
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZI
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BU of 6bzi by Molmil
Crystal structure of halogenase PltM in complex with ethyl mercury and mercury
Descriptor: CALCIUM ION, ETHYL MERCURY ION, GLYCEROL, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-24
Release date:2019-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
5HMC
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BU of 5hmc by Molmil
Crystal structure of S. sahachiroi AziG complexed with 5-methyl naphthoic acid
Descriptor: 5-methylnaphthalene-1-carboxylic acid, Azi13, SULFATE ION
Authors:Zhang, Y, Erb, M.S, Ealick, S.E.
Deposit date:2016-01-15
Release date:2016-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Polyketide Ring Expansion Mediated by a Thioesterase, Chain Elongation and Cyclization Domain, in Azinomycin Biosynthesis: Characterization of AziB and AziG.
Biochemistry, 55, 2016
5HMB
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BU of 5hmb by Molmil
Crystal structure of S. sahachiroi AziG
Descriptor: Azi13, SULFATE ION
Authors:Erb, M.S, Zhang, Y, Ealick, S.E.
Deposit date:2016-01-15
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Polyketide Ring Expansion Mediated by a Thioesterase, Chain Elongation and Cyclization Domain, in Azinomycin Biosynthesis: Characterization of AziB and AziG.
Biochemistry, 55, 2016
6A56
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BU of 6a56 by Molmil
AJLec from the Sea Anemone Anthopleura japonica
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AJLec, CALCIUM ION, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2018-06-22
Release date:2018-07-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Lectin AJLec from the Sea Anemone Anthopleura japonica.
Sci Rep, 8, 2018
6RC9
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BU of 6rc9 by Molmil
P1 Mycoplasma pneumoniae
Descriptor: Adhesin P1
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I.
Deposit date:2019-04-11
Release date:2020-11-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
6RJ1
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BU of 6rj1 by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae
Descriptor: Mgp-operon protein 3
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I.
Deposit date:2019-04-25
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
6TLZ
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BU of 6tlz by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae complexed with 3'SL
Descriptor: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I, Perez-Luque, R, Martin, J.
Deposit date:2019-12-03
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
6TM0
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BU of 6tm0 by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae complexed with 6'SL
Descriptor: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I, Perez-Luque, R, Martin, J.
Deposit date:2019-12-03
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
7EA6
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BU of 7ea6 by Molmil
Crystal structure of TCR-017 ectodomain
Descriptor: T cell receptor 017 alpha chain, T cell receptor 017 beta chain
Authors:Nagae, M, Yamasaki, S.
Deposit date:2021-03-06
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.18000245 Å)
Cite:Identification of conserved SARS-CoV-2 spike epitopes that expand public cTfh clonotypes in mild COVID-19 patients.
J.Exp.Med., 218, 2021
7YKB
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BU of 7ykb by Molmil
Neutron Structure of PcyA D105N Mutant Complexed with Biliverdin at Room Temperature
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase, SODIUM ION
Authors:Unno, M, Nanasawa, R.
Deposit date:2022-07-22
Release date:2023-01-25
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.38 Å), X-RAY DIFFRACTION
Cite:Neutron crystallography and quantum chemical analysis of bilin reductase PcyA mutants reveal substrate and catalytic residue protonation states.
J.Biol.Chem., 299, 2022
7YK9
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BU of 7yk9 by Molmil
Neutron Structure of PcyA I86D Mutant Complexed with Biliverdin at Room Temperature
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase
Authors:Unno, M, Igarashi, K.
Deposit date:2022-07-22
Release date:2023-01-25
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Neutron crystallography and quantum chemical analysis of bilin reductase PcyA mutants reveal substrate and catalytic residue protonation states.
J.Biol.Chem., 299, 2022
7BWM
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BU of 7bwm by Molmil
Cryo-EM structure of the human pathogen Mycoplasma pneumoniae P1
Descriptor: Adhesin P1
Authors:Kawamoto, A, Kenri, T, Namba, K, Miyata, M.
Deposit date:2020-04-15
Release date:2020-10-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
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