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1Z1A
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BU of 1z1a by Molmil
S. cerevisiae Sir1 ORC-interaction domain
Descriptor: Regulatory protein SIR1
Authors:Hou, Z, Bernstein, D.A, Fox, C.A, Keck, J.L.
Deposit date:2005-03-03
Release date:2005-06-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of the Sir1-origin recognition complex interaction in transcriptional silencing.
Proc.Natl.Acad.Sci.Usa, 102, 2005
7R7J
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BU of 7r7j by Molmil
Crystal structure of RadD with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative DNA repair helicase RadD, ...
Authors:Osorio Garcia, M.A, Satyshur, K.A, Keck, J.L, Cox, M.M.
Deposit date:2021-06-24
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:X-ray crystal structure of the Escherichia coli RadD DNA repair protein bound to ADP reveals a novel zinc ribbon domain.
Plos One, 17, 2022
1ZHI
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BU of 1zhi by Molmil
Complex of the S. cerevisiae Orc1 and Sir1 interacting domains
Descriptor: Origin recognition complex subunit 1, Regulatory protein SIR1
Authors:Hou, Z, Bernstein, D.A, Fox, C.A, Keck, J.L.
Deposit date:2005-04-25
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the Sir1-origin recognition complex interaction in transcriptional silencing.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4Z0U
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BU of 4z0u by Molmil
RNase HI/SSB-Ct complex
Descriptor: Ribonuclease H, SSB-Ct Peptide
Authors:Petzold, C, Keck, J.L.
Deposit date:2015-03-26
Release date:2015-04-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interaction with Single-stranded DNA-binding Protein Stimulates Escherichia coli Ribonuclease HI Enzymatic Activity.
J.Biol.Chem., 290, 2015
2PNH
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BU of 2pnh by Molmil
Escherichia coli PriB E39A variant
Descriptor: Primosomal replication protein n
Authors:Lopper, M.E, Keck, J.L.
Deposit date:2007-04-24
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A hand-off mechanism for primosome assembly in replication restart.
Mol.Cell, 26, 2007
2RHP
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BU of 2rhp by Molmil
The Thrombospondin-1 Polymorphism Asn700Ser Associated with Cornoary Artery Disease Causes Local and Long-Ranging Changes in Protein Structure
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Carlson, C.B, Keck, J.L, Mosher, D.F.
Deposit date:2007-10-09
Release date:2008-05-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Influences of the N700S Thrombospondin-1 Polymorphism on Protein Structure and Stability.
J.Biol.Chem., 283, 2008
4NL8
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BU of 4nl8 by Molmil
PriA Helicase Bound to SSB C-terminal Tail Peptide
Descriptor: Primosome assembly protein PriA, Single-stranded DNA-binding protein, ZINC ION
Authors:Bhattacharyya, B, George, N.P, Thurmes, T.M, Keck, J.L.
Deposit date:2013-11-13
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.08 Å)
Cite:Structural mechanisms of PriA-mediated DNA replication restart.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NL4
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BU of 4nl4 by Molmil
PriA Helicase Bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Primosome assembly protein PriA, ZINC ION
Authors:Bhattacharyya, B, George, N.P, Keck, J.L.
Deposit date:2013-11-13
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural mechanisms of PriA-mediated DNA replication restart.
Proc.Natl.Acad.Sci.USA, 111, 2014
1OYW
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BU of 1oyw by Molmil
Structure of the RecQ Catalytic Core
Descriptor: ATP-dependent DNA helicase, MANGANESE (II) ION, ZINC ION
Authors:Bernstein, D.A, Zittel, M.C, Keck, J.L.
Deposit date:2003-04-07
Release date:2003-10-07
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution structure of the E. coli RecQ helicase catalytic core
Embo J., 22, 2003
1OYY
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BU of 1oyy by Molmil
Structure of the RecQ Catalytic Core bound to ATP-gamma-S
Descriptor: ATP-dependent DNA helicase, MANGANESE (II) ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Bernstein, D.A, Zittel, M.C, Keck, J.L.
Deposit date:2003-04-07
Release date:2003-10-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High-resolution structure of the E. coli RecQ helicase catalytic core
Embo J., 22, 2003
3SXU
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BU of 3sxu by Molmil
Structure of the E. coli SSB-DNA polymerase III interface
Descriptor: DNA polymerase III subunit chi, DNA polymerase III subunit psi, SSB peptide
Authors:Marceau, A.H, Keck, J.L.
Deposit date:2011-07-15
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the SSB-DNA polymerase III interface and its role in DNA replication.
Embo J., 30, 2011
3VDY
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BU of 3vdy by Molmil
B. subtilis SsbB/ssDNA
Descriptor: 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', Single-stranded DNA-binding protein ssbB
Authors:Yadav, T, Carrasco, B, Myers, A.R, George, N.P, Keck, J.L, Alonso, J.C.
Deposit date:2012-01-06
Release date:2012-03-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Genetic recombination in Bacillus subtilis: a division of labor between two single-strand DNA-binding proteins.
Nucleic Acids Res., 40, 2012
3V8E
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BU of 3v8e by Molmil
Crystal structure of the yeast nicotinamidase Pnc1p bound to the inhibitor nicotinaldehyde
Descriptor: MAGNESIUM ION, Nicotinamidase, ZINC ION
Authors:Hoadley, K.A, Smith, B.C, Denu, J.M, Keck, J.L.
Deposit date:2011-12-22
Release date:2012-01-25
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural and Kinetic Isotope Effect Studies of Nicotinamidase (Pnc1) from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
3UFM
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BU of 3ufm by Molmil
Co-crystal structure of Deinococcus radiodurans uracil-DNA glycosylase and the C-terminus of the single-stranded DNA-binding protein
Descriptor: IODIDE ION, Single-stranded DNA-binding protein, Uracil-DNA glycosylase
Authors:George, N.P, Keck, J.L.
Deposit date:2011-11-01
Release date:2012-11-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification of the SSB-interaction platform of Deinococcus radiodurans uracil-DNA glycosylase
To be Published
3UDG
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BU of 3udg by Molmil
Structure of Deinococcus radiodurans SSB bound to ssDNA
Descriptor: 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', Single-stranded DNA-binding protein, THYMIDINE-5'-PHOSPHATE
Authors:George, N.P, Ngo, K.V, Chitteni-Patu, S, Norais, C.A, Battista, J.R, Cox, M.M, Keck, J.L.
Deposit date:2011-10-28
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Cellular Dynamics of Deinococcus radiodurans Single-stranded DNA (ssDNA)-binding Protein (SSB)-DNA Complexes.
J.Biol.Chem., 287, 2012
3UF7
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BU of 3uf7 by Molmil
Co-crystal structure of Escherichia coli uracil-DNA glycosylase and a C-terminal fragement of the single-stranded DNA-binding protein
Descriptor: SULFATE ION, Single-stranded DNA-binding protein, Uracil-DNA glycosylase
Authors:George, N.P, Liban, T.J, Reyes-Lamothe, R, Keck, J.L.
Deposit date:2011-10-31
Release date:2012-11-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Identification of the SSB-interaction platform of Escherichia coli uracil-DNA glycosylase
To be Published
3C94
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BU of 3c94 by Molmil
ExoI/SSB-Ct complex
Descriptor: Exodeoxyribonuclease I, MAGNESIUM ION, Single-stranded DNA-binding C-terminal tail peptide
Authors:Lu, D, Keck, J.L.
Deposit date:2008-02-15
Release date:2008-07-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of Escherichia coli single-stranded DNA-binding protein stimulation of exonuclease I.
Proc.Natl.Acad.Sci.USA, 105, 2008
3C9D
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BU of 3c9d by Molmil
Crystal structure of Vps75
Descriptor: Vacuolar protein sorting-associated protein 75
Authors:Berndsen, C.E, Tsubota, T, Lindner, S.E, Lee, S, Holton, J.M, Kaufman, P.D, Keck, J.L, Denu, J.M.
Deposit date:2008-02-15
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular functions of the histone acetyltransferase chaperone complex Rtt109-Vps75
Nat.Struct.Mol.Biol., 15, 2008
6BHX
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BU of 6bhx by Molmil
B. subtilis SsbA with DNA
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Single-stranded DNA-binding protein A
Authors:Dubiel, K.D, Myers, A.R, Satyshur, K.A, Keck, J.L.
Deposit date:2017-10-31
Release date:2018-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.936 Å)
Cite:Structural Mechanisms of Cooperative DNA Binding by Bacterial Single-Stranded DNA-Binding Proteins.
J. Mol. Biol., 431, 2019
6D9Q
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BU of 6d9q by Molmil
The sulfate-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)
Descriptor: GLYCEROL, Hypoxanthine phosphoribosyltransferase, SULFATE ION
Authors:Satyshur, K.A, Dubiel, K, Anderson, B, Wolak, C, Keck, J.L.
Deposit date:2018-04-30
Release date:2019-05-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.056 Å)
Cite:Evolution of (p)ppGpp-HPRT regulation through diversification of an allosteric oligomeric interaction.
Elife, 8, 2019
6DCR
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BU of 6dcr by Molmil
E. coli PriA helicase winged helix domain deletion protein
Descriptor: Primosomal protein N', SULFATE ION, ZINC ION
Authors:Satyshur, K.A, Windgassen, T.A, Keck, J.L.
Deposit date:2018-05-08
Release date:2018-09-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Structure-specific DNA replication-fork recognition directs helicase and replication restart activities of the PriA helicase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CRM
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BU of 6crm by Molmil
Crystal Structure of RecQ catalytic core from C. sakazakii bound to an unfolded G-quadruplex
Descriptor: DNA (5'-D(P*GP*GP*GP*TP*CP*GP*GP*TP*GP*CP*CP*TP*TP*A)-3'), RecQ, ZINC ION
Authors:Voter, A.F, Keck, J.L.
Deposit date:2018-03-19
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.19286251 Å)
Cite:A guanine-flipping and sequestration mechanism for G-quadruplex unwinding by RecQ helicases.
Nat Commun, 9, 2018
6D9R
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BU of 6d9r by Molmil
The substrate-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)
Descriptor: 1,2-ETHANEDIOL, 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 9-DEAZAGUANINE, ...
Authors:Satyshur, K.A, Wolak, C, Anderson, B, Dubiel, K, Keck, J.L.
Deposit date:2018-04-30
Release date:2019-05-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Evolution of (p)ppGpp-HPRT regulation through diversification of an allosteric oligomeric interaction.
Elife, 8, 2019
6BHW
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BU of 6bhw by Molmil
B. subtilis SsbA
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Single-stranded DNA-binding protein A
Authors:Dubiel, K.D, Myers, A.R, Satyshur, K.A, Keck, J.L.
Deposit date:2017-10-31
Release date:2018-12-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Structural Mechanisms of Cooperative DNA Binding by Bacterial Single-Stranded DNA-Binding Proteins.
J. Mol. Biol., 431, 2019
6DGD
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BU of 6dgd by Molmil
PriA helicase bound to dsDNA of a DNA replication fork
Descriptor: DNA (5'-D(P*AP*GP*CP*AP*CP*GP*CP*CP*GP*AP*CP*T)-3'), DNA (5'-D(P*GP*AP*GP*CP*AP*CP*GP*CP*CP*GP*AP*CP*T)-3'), DNA (5'-D(P*GP*TP*CP*GP*GP*CP*GP*TP*GP*CP*TP*C)-3'), ...
Authors:Satyshur, K.A, Windgassen, T.A, Keck, J.L.
Deposit date:2018-05-17
Release date:2018-09-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.823 Å)
Cite:Structure-specific DNA replication-fork recognition directs helicase and replication restart activities of the PriA helicase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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PDB entries from 2024-11-06

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