Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2JJL
DownloadVisualize
BU of 2jjl by Molmil
Structure of avian reovirus sigmaC117-326, P321 crystal form
Descriptor: CHLORIDE ION, SIGMA-C CAPSID PROTEIN, SULFATE ION, ...
Authors:Guardado-Calvo, P, Fox, G.C, Llamas-Saiz, A.L, Benavente, J, van Raaij, M.J.
Deposit date:2008-04-14
Release date:2009-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic structure of the alpha-helical triple coiled-coil domain of avian reovirus S1133 fibre.
J. Gen. Virol., 90, 2009
6H5C
DownloadVisualize
BU of 6h5c by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 1
Descriptor: (1~{S},3~{R},4~{S},5~{R})-3-methyl-3,4,5-tris(hydroxyl)cyclohexane-1-carboxylic Acid, 3-dehydroquinate dehydratase
Authors:Sanz-Gaitero, M, Maneiro, M, Lence, E, Otero, J.M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 9, 2019
6H5J
DownloadVisualize
BU of 6h5j by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 4
Descriptor: (3~{R})-3,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Otero, J.M, Maneiro, M, Lence, E, Sanz-Gaitero, M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 6, 2019
3J4A
DownloadVisualize
BU of 3j4a by Molmil
Structure of gp8 connector protein
Descriptor: Head-to-tail joining protein
Authors:Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
Deposit date:2013-07-09
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
2BSF
DownloadVisualize
BU of 2bsf by Molmil
Structure of the C-terminal receptor-binding domain of avian reovirus fibre sigmaC, Zn crystal form.
Descriptor: SIGMA C CAPSID PROTEIN, SULFATE ION, ZINC ION
Authors:Guardado Calvo, P, Fox, G.C, Hermo Parrado, X.L, Llamas-Saiz, A.L, van Raaij, M.J.
Deposit date:2005-05-20
Release date:2005-11-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the Carboxy-Terminal Receptor-Binding Domain of Avian Reovirus Fibre Sigmac
J.Mol.Biol., 354, 2005
3J4B
DownloadVisualize
BU of 3j4b by Molmil
Structure of T7 gatekeeper protein (gp11)
Descriptor: Tail tubular protein A
Authors:Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
Deposit date:2013-07-09
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
4A0T
DownloadVisualize
BU of 4a0t by Molmil
Structure of the carboxy-terminal domain of bacteriophage T7 fibre gp17 containing residues 371-553.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PENTAETHYLENE GLYCOL, TAIL FIBER PROTEIN, ...
Authors:Garcia-Doval, C, van Raaij, M.J.
Deposit date:2011-09-12
Release date:2012-05-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the receptor-binding carboxy-terminal domain of bacteriophage T7 tail fibers.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
1V1H
DownloadVisualize
BU of 1v1h by Molmil
Adenovirus fibre shaft sequence N-terminally fused to the bacteriophage T4 fibritin foldon trimerisation motif with a short linker
Descriptor: FIBRITIN, FIBER PROTEIN
Authors:Papanikolopoulou, K, Teixeira, S, Belrhali, H, Forsyth, V.T, Mitraki, A, van Raaij, M.J.
Deposit date:2004-04-16
Release date:2004-07-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Adenovirus Fibre Shaft Sequences Fold Into the Native Triple Beta-Spiral Fold When N-Terminally Fused to the Bacteriophage T4 Fibritin Foldon Trimerisation Motif
J.Mol.Biol., 342, 2004
4A0U
DownloadVisualize
BU of 4a0u by Molmil
Structure of the carboxy-terminal domain of bacteriophage T7 fibre gp17 containing residues 371-553, C2221 crystal form.
Descriptor: CARBONATE ION, TAIL FIBER PROTEIN
Authors:Garcia-Doval, C, van Raaij, M.J.
Deposit date:2011-09-12
Release date:2012-05-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the receptor-binding carboxy-terminal domain of bacteriophage T7 tail fibers.
Proc. Natl. Acad. Sci. U.S.A., 109, 2012
1V1I
DownloadVisualize
BU of 1v1i by Molmil
Adenovirus fibre shaft sequence N-terminally fused to the bacteriophage T4 fibritin foldon trimerisation motif with a long linker
Descriptor: FIBRITIN, FIBER PROTEIN
Authors:Papanikolopoulou, K, Teixeira, S, Belrhali, H, Forsyth, V.T, Mitraki, A, van Raaij, M.J.
Deposit date:2004-04-16
Release date:2004-07-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Adenovirus Fibre Shaft Sequences Fold Into the Native Triple Beta-Spiral Fold When N-Terminally Fused to the Bacteriophage T4 Fibritin Foldon Trimerisation Motif
J.Mol.Biol., 342, 2004
5NXH
DownloadVisualize
BU of 5nxh by Molmil
Crystal structure of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34, residues 744-1289 at 2.9 Angstrom resolution
Descriptor: GLYCEROL, Long-tail fiber proximal subunit
Authors:Namura, M, van Raaij, M.J, Kanamaru, S.
Deposit date:2017-05-10
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34.
Viruses, 9, 2017
5NXF
DownloadVisualize
BU of 5nxf by Molmil
Crystal structure of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34, residues 795 to 1289, at 1.9 Angstrom.
Descriptor: ACETATE ION, GLYCEROL, Long-tail fiber proximal subunit, ...
Authors:Namura, M, van Raaij, M.J, Kanamaru, S.
Deposit date:2017-05-10
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34.
Viruses, 9, 2017
6H5D
DownloadVisualize
BU of 6h5d by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 2
Descriptor: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Sanz-Gaitero, M, Maneiro, M, Lence, E, Otero, J.M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 9, 2019
6H5G
DownloadVisualize
BU of 6h5g by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 3
Descriptor: (1~{R},3~{S},4~{R},5~{R})-3-methyl-4,5-bis(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Sanz-Gaitero, M, Maneiro, M, Lence, E, Otero, J.M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 6, 2019
2IUN
DownloadVisualize
BU of 2iun by Molmil
Structure of the C-terminal head domain of the avian adenovirus CELO long fibre (P21 crystal form)
Descriptor: AVIAN ADENOVIRUS CELO LONG FIBRE, CALCIUM ION
Authors:Guardado-Calvo, P, Llamas-Saiz, A.L, Fox, G.C, van Raaij, M.J.
Deposit date:2006-06-06
Release date:2007-06-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the C-terminal head domain of the fowl adenovirus type 1 long fiber.
J. Gen. Virol., 88, 2007
2IUM
DownloadVisualize
BU of 2ium by Molmil
Structure of the C-terminal head domain of the avian adenovirus CELO long fibre (C2 crystal form)
Descriptor: AVIAN ADENOVIRUS CELO LONG FIBRE
Authors:Guardado-Calvo, P, Llamas-Saiz, A.L, Fox, G.C, van Raaij, M.J.
Deposit date:2006-06-06
Release date:2007-06-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the C-terminal head domain of the fowl adenovirus type 1 long fiber.
J. Gen. Virol., 88, 2007
5FX0
DownloadVisualize
BU of 5fx0 by Molmil
Fasciola hepatica calcium binding protein FhCaBP2: Structure of the dynein light chain-like domain. P6422 native.
Descriptor: CALCIUM BINDING PROTEIN
Authors:Nguyen, T.H, Thomas, C.M, Timson, D.J, van Raaij, M.J.
Deposit date:2016-02-22
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Fasciola hepatica calcium-binding protein FhCaBP2: structure of the dynein light chain-like domain.
Parasitol. Res., 115, 2016
5FJL
DownloadVisualize
BU of 5fjl by Molmil
Crystal structure of raptor adenovirus 1 fibre head, wild-type form
Descriptor: CHLORIDE ION, FIBER PROTEIN
Authors:Nguyen, T.H, van Raaij, M.J.
Deposit date:2015-10-09
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal Structure of Raptor Adenovirus 1 Fibre Head and Role of the Beta-Hairpin in Siadenovirus Fibre Head Domains
Virol.J., 13, 2016
5FLD
DownloadVisualize
BU of 5fld by Molmil
Crystal structure of raptor adenovirus 1 fibre head, beta-hairpin deleted form
Descriptor: CHLORIDE ION, FIBER PROTEIN
Authors:Nguyen, T.H, van Raaij, M.J.
Deposit date:2015-10-23
Release date:2016-06-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of raptor adenovirus 1 fibre head and role of the beta-hairpin in siadenovirus fibre head domains.
Virol. J., 13, 2016
5G5O
DownloadVisualize
BU of 5g5o by Molmil
Structure of the snake adenovirus 1 hexon-interlacing LH3 protein, native
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Nguyen, T.H, Singh, A.K, Albala-Perez, B, van Raaij, M.J.
Deposit date:2016-05-26
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a Reptilian Adenovirus Reveals a Phage Tailspike Fold Stabilizing a Vertebrate Virus Capsid.
Structure, 25, 2017
5G5N
DownloadVisualize
BU of 5g5n by Molmil
Structure of the snake adenovirus 1 hexon-interlacing LH3 protein, methylmercury chloride derivative
Descriptor: CHLORIDE ION, GLYCEROL, LH3 HEXON-INTERLACING CAPSID PROTEIN, ...
Authors:Nguyen, T.H, Singh, A.K, Albala-Perez, B, van Raaij, M.J.
Deposit date:2016-05-26
Release date:2017-06-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a Reptilian Adenovirus Reveals a Phage Tailspike Fold Stabilizing a Vertebrate Virus Capsid.
Structure, 25, 2017
1EFR
DownloadVisualize
BU of 1efr by Molmil
BOVINE MITOCHONDRIAL F1-ATPASE COMPLEXED WITH THE PEPTIDE ANTIBIOTIC EFRAPEPTIN
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT ALPHA, BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT BETA, ...
Authors:Abrahams, J.P, Buchanan, S.K, Van Raaij, M.J, Fearnley, I.M, Leslie, A.G.W, Walker, J.E.
Deposit date:1996-05-24
Release date:1997-02-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Structure of Bovine F1-ATPase Complexed with the Peptide Antibiotic Efrapeptin.
Proc.Natl.Acad.Sci.USA, 93, 1996
1PDI
DownloadVisualize
BU of 1pdi by Molmil
Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate
Descriptor: Short tail fiber protein
Authors:Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2003-05-19
Release date:2003-09-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1OCY
DownloadVisualize
BU of 1ocy by Molmil
Structure of the receptor-binding domain of the bacteriophage T4 short tail fibre
Descriptor: BACTERIOPHAGE T4 SHORT TAIL FIBRE, CITRIC ACID, SULFATE ION, ...
Authors:Thomassen, E, Gielen, G, Schuetz, M, Miller, S, van Raaij, M.J.
Deposit date:2003-02-11
Release date:2003-07-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Structure of the Receptor-Binding Domain of the Bacteriophage T4 Short Tail Fibre Reveals a Knitted Trimeric Metal-Binding Fold
J.Mol.Biol., 331, 2003
2XGF
DownloadVisualize
BU of 2xgf by Molmil
Structure of the bacteriophage T4 long tail fibre needle-shaped receptor-binding tip
Descriptor: CARBONATE ION, FE (II) ION, LONG TAIL FIBER PROTEIN P37
Authors:Bartual, S.G, Otero, J.M, Garcia-Doval, C, Llamas-Saiz, A.L, Kahn, R, Fox, G.C, van Raaij, M.J.
Deposit date:2010-06-03
Release date:2010-11-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the bacteriophage T4 long tail fiber receptor-binding tip.
Proc. Natl. Acad. Sci. U.S.A., 107, 2010

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon