Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6S7X
DownloadVisualize
BU of 6s7x by Molmil
dARC1 capsid domain dimer, orthorhombic form at 1.7 Angstrom
Descriptor: Activity-regulated cytoskeleton associated protein 1, CHLORIDE ION, SODIUM ION
Authors:Cottee, M.A, Taylor, I.A.
Deposit date:2019-07-07
Release date:2020-01-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure ofDrosophila melanogasterARC1 reveals a repurposed molecule with characteristics of retroviral Gag.
Sci Adv, 6, 2020
6S7Y
DownloadVisualize
BU of 6s7y by Molmil
dARC1 capsid domain dimer, hexagonal form at 2.3 Angstrom
Descriptor: Activity-regulated cytoskeleton associated protein 1
Authors:Cottee, M.A, Taylor, I.A.
Deposit date:2019-07-07
Release date:2020-01-15
Last modified:2020-01-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure ofDrosophila melanogasterARC1 reveals a repurposed molecule with characteristics of retroviral Gag.
Sci Adv, 6, 2020
6SAI
DownloadVisualize
BU of 6sai by Molmil
NMR solution structure of Hml-2 C-terminal dimer domain
Descriptor: Gag protein
Authors:Nicastro, G, Taylor, I.A, Ball, N.J, Ramos, A.
Deposit date:2019-07-16
Release date:2020-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
6SSL
DownloadVisualize
BU of 6ssl by Molmil
Human endogenous retrovirus (HML2) mature capsid assembly, D6 capsule
Descriptor: Endogenous retrovirus group K member 24 Gag polyprotein
Authors:Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:2019-09-08
Release date:2020-01-01
Last modified:2020-03-11
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
6SA9
DownloadVisualize
BU of 6sa9 by Molmil
Endogenous Retrovirus HML2 Capsid NTD
Descriptor: Endogenous retrovirus group K member 9 Pol protein, GLYCEROL
Authors:Goldstone, D.C, Ball, N.J, Taylor, I.A.
Deposit date:2019-07-16
Release date:2020-01-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
6SSJ
DownloadVisualize
BU of 6ssj by Molmil
Human endogenous retrovirus (HML2) mature capsid assembly, T=1 icosahedron
Descriptor: Endogenous retrovirus group K member 24 Gag polyprotein
Authors:Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:2019-09-08
Release date:2020-01-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
6SSM
DownloadVisualize
BU of 6ssm by Molmil
Human endogenous retrovirus (HML2) mature capsid assembly, T=3 icosahedron
Descriptor: Endogenous retrovirus group K member 24 Gag polyprotein
Authors:Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:2019-09-08
Release date:2020-01-01
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.34 Å)
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
6SSK
DownloadVisualize
BU of 6ssk by Molmil
Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule
Descriptor: Endogenous retrovirus group K member 24 Gag polyprotein
Authors:Acton, O.J.H, Taylor, I.A, Rosenthal, P.B.
Deposit date:2019-09-08
Release date:2020-01-01
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural basis for Fullerene geometry in a human endogenous retrovirus capsid.
Nat Commun, 10, 2019
4TN3
DownloadVisualize
BU of 4tn3 by Molmil
Structure of the BBox-Coiled-coil region of Rhesus Trim5alpha
Descriptor: TRIM5/cyclophilin A fusion protein/T4 Lysozyme chimera, ZINC ION
Authors:Kirkpatrick, J.J, Stoye, J.P, Taylor, I.A, Goldstone, D.C.
Deposit date:2014-06-03
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1989 Å)
Cite:Structural studies of postentry restriction factors reveal antiparallel dimers that enable avid binding to the HIV-1 capsid lattice.
Proc.Natl.Acad.Sci.USA, 111, 2014
5AJA
DownloadVisualize
BU of 5aja by Molmil
Crystal structure of mandrill SAMHD1 (amino acid residues 1-114) bound to Vpx isolated from mandrill and human DCAF1 (amino acid residues 1058-1396)
Descriptor: PROTEIN VPRBP, SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN, VPX PROTEIN, ...
Authors:Schwefel, D, Boucherit, V.C, Christodoulou, E, Walker, P.A, Stoye, J.P, Bishop, K.N, Taylor, I.A.
Deposit date:2015-02-20
Release date:2015-04-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.649 Å)
Cite:Molecular Determinants for Recognition of Divergent Samhd1 Proteins by the Lentiviral Accessory Protein Vpx.
Cell Host Microbe., 17, 2015
5AO1
DownloadVisualize
BU of 5ao1 by Molmil
Crystal structure of human SAMHD1 (amino acid residues 115-583) bound to ddGTP
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, FE (III) ION, ...
Authors:Schwefel, D, Taylor, I.A.
Deposit date:2015-09-09
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.545 Å)
Cite:Phospho-Dependent Regulation of Samhd1 Oligomerisation Couples Catalysis and Restriction.
Plos Pathog., 11, 2015
5AO2
DownloadVisualize
BU of 5ao2 by Molmil
Crystal structure of human SAMHD1 (amino acid residues 115-583) R164A variant bound to dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, FE (III) ION
Authors:Schwefel, D, Taylor, I.A.
Deposit date:2015-09-09
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.966 Å)
Cite:Phospho-Dependent Regulation of Samhd1 Oligomerisation Couples Catalysis and Restriction.
Plos Pathog., 11, 2015
5AO0
DownloadVisualize
BU of 5ao0 by Molmil
Crystal structure of human SAMHD1 (amino acid residues 41-583) bound to ddGTP
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, FE (III) ION, ...
Authors:Schwefel, D, Taylor, I.A.
Deposit date:2015-09-09
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.731 Å)
Cite:Phospho-Dependent Regulation of Samhd1 Oligomerisation Couples Catalysis and Restriction.
Plos Pathog., 11, 2015
5AO3
DownloadVisualize
BU of 5ao3 by Molmil
Crystal structure of human SAMHD1 (amino acid residues 115-626) bound to GTP
Descriptor: DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, FE (III) ION, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Schwefel, D, Taylor, I.A.
Deposit date:2015-09-09
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Phospho-Dependent Regulation of Samhd1 Oligomerisation Couples Catalysis and Restriction.
Plos Pathog., 11, 2015
5AO4
DownloadVisualize
BU of 5ao4 by Molmil
Crystal structure of in vitro phosphorylated human SAMHD1 (amino acid residues 115-626) bound to GTP
Descriptor: DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, FE (III) ION, GUANOSINE-5'-TRIPHOSPHATE
Authors:Arnold, L.H, Schwefel, D, Taylor, I.A.
Deposit date:2015-09-09
Release date:2015-10-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Phospho-Dependent Regulation of Samhd1 Oligomerisation Couples Catalysis and Restriction.
Plos Pathog., 11, 2015
6XU1
DownloadVisualize
BU of 6xu1 by Molmil
Crystal structure of tetrameric human H215A-SAMHD1 (residues 109-626) with GTP, dAMPNPP and Mg
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION, ...
Authors:Morris, E.R, Kunzelmann, S, Caswell, S.J, Arnold, L.H, Purkiss, A.G, Kelly, G, Taylor, I.A.
Deposit date:2020-01-17
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of SAMHD1 inhibitor complexes reveal the mechanism of water-mediated dNTP hydrolysis.
Nat Commun, 11, 2020
2ASB
DownloadVisualize
BU of 2asb by Molmil
Structure of a Mycobacterium tuberculosis NusA-RNA complex
Descriptor: Transcription elongation protein nusA, ribosomal RNA (5'- GAACUCAAUAG -3')
Authors:Beuth, B, Pennell, S, Arnvig, K.B, Martin, S.R, Taylor, I.A.
Deposit date:2005-08-23
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a Mycobacterium tuberculosis NusA-RNA complex.
Embo J., 24, 2005
2ATW
DownloadVisualize
BU of 2atw by Molmil
Structure of a Mycobacterium tuberculosis NusA-RNA complex
Descriptor: Transcription elongation protein nusA, ribosomal RNA (5'- AGAACUCAAUAG -3')
Authors:Beuth, B, Pennell, S, Arnvig, K.B, Martin, S.R, Taylor, I.A.
Deposit date:2005-08-26
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of a Mycobacterium tuberculosis NusA-RNA complex.
Embo J., 24, 2005
2BF0
DownloadVisualize
BU of 2bf0 by Molmil
crystal structure of the rpr of pcf11
Descriptor: CALCIUM ION, PCF11
Authors:Noble, C.G, Hollingworth, D, Martin, S.R, Adeniran, V.E, Smerdon, S.J, Kelly, G, Taylor, I.A, Ramos, A.
Deposit date:2004-12-02
Release date:2005-01-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Key Features of the Interaction between Pcf11 Cid and RNA Polymerase II Ctd.
Nat.Struct.Mol.Biol., 12, 2005
2X1A
DownloadVisualize
BU of 2x1a by Molmil
Structure of Rna15 RRM with RNA bound (G)
Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MAGNESIUM ION, MRNA 3'-END-PROCESSING PROTEIN RNA15
Authors:Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
Deposit date:2010-01-06
Release date:2010-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2X1F
DownloadVisualize
BU of 2x1f by Molmil
Structure of Rna15 RRM with bound RNA (GU)
Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MRNA 3'-END-PROCESSING PROTEIN RNA15
Authors:Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
Deposit date:2010-01-06
Release date:2010-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2X1B
DownloadVisualize
BU of 2x1b by Molmil
Structure of RNA15 RRM
Descriptor: MRNA 3'-END-PROCESSING PROTEIN RNA15, PHOSPHATE ION
Authors:Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
Deposit date:2010-01-06
Release date:2010-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2Y4Z
DownloadVisualize
BU of 2y4z by Molmil
Structure of the amino-terminal capsid restriction escape mutation N- MLV L10W
Descriptor: CAPSID PROTEIN P30, GLYCEROL
Authors:Goldstone, D.C, Holden-Dye, K, Ohkura, S, Stoye, J.P, Taylor, I.A.
Deposit date:2011-01-11
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Novel Escape Mutants Suggest an Extensive Trim5Alpha Binding Site Spanning the Entire Outer Surface of the Murine Leukemia Virus Capsid Protein.
Plos Pathog., 7, 2011
8COO
DownloadVisualize
BU of 8coo by Molmil
Solution structure of Zipcode binding protein 1 (ZBP1) KH3(DD)KH4 domains in complex with N6-Methyladenosine containing RNA
Descriptor: Insulin-like growth factor 2 mRNA-binding protein 1, RNA_(5'-R(*(UP*CP*GP*GP*(6MZ)P*CP*U)-3')
Authors:Nicastro, G, Abis, G, Taylor, I.A, Ramos, A.
Deposit date:2023-02-28
Release date:2024-02-07
Method:SOLUTION NMR
Cite:Direct m6A recognition by IMP1 underlays an alternative model of target selection for non-canonical methyl-readers.
Nucleic Acids Res., 51, 2023
2NPI
DownloadVisualize
BU of 2npi by Molmil
Clp1-ATP-Pcf11 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein CLP1, ...
Authors:Noble, C.G, Beuth, B, Taylor, I.A.
Deposit date:2006-10-27
Release date:2006-12-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a nucleotide-bound Clp1-Pcf11 polyadenylation factor
Nucleic Acids Res., 35, 2007

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon