Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5YSZ
DownloadVisualize
BU of 5ysz by Molmil
transcriptional regulator CelR-cellobiose complex
Descriptor: GLYCEROL, Transcriptional regulator, LacI family, ...
Authors:Fu, Y, Yeom, S.Y, Lee, D.H, Lee, S.G.
Deposit date:2017-11-16
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Structural and functional analyses of the cellulase transcription regulator CelR
FEBS Lett., 592, 2018
4WXR
DownloadVisualize
BU of 4wxr by Molmil
X-ray crystal structure of NS3 Helicase from HCV with a bound inhibitor at 2.42 A resolution
Descriptor: NS3, {6-(3,5-diaminophenyl)-1-[4-(propan-2-yl)benzyl]-1H-indol-3-yl}acetic acid
Authors:Davies, D.R, Kim, H, Lorimer, D.
Deposit date:2014-11-14
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:crystal structure of NS3 Helicase from HCV with a bound inhibitor
TO BE PUBLISHED
3OUI
DownloadVisualize
BU of 3oui by Molmil
PHD2-R717 with 40787422
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Egl nine homolog 1, ...
Authors:Arakaki, T.L, Kim, H.
Deposit date:2010-09-14
Release date:2010-12-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Benzimidazole-2-pyrazole HIF Prolyl 4-Hydroxylase Inhibitors as Oral Erythropoietin Secretagogues.
ACS Med Chem Lett, 1, 2010
2JR5
DownloadVisualize
BU of 2jr5 by Molmil
Solution structure of UPF0350 protein VC_2471. Northeast Structural Genomics Target VcR36
Descriptor: UPF0350 protein VC_2471
Authors:Wu, Y, Parish, D, Singarapu, K.K, Sukumaran, D, Eletski, A, Shastry, R, Nwosu, C, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-06-20
Release date:2007-07-24
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of UPF0350 protein VC_2471.
To be Published
3QJ5
DownloadVisualize
BU of 3qj5 by Molmil
S-nitrosoglutathione reductase (GSNOR) in complex with N6022
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-{1-(4-carbamoyl-2-methylphenyl)-5-[4-(1H-imidazol-1-yl)phenyl]-1H-pyrrol-2-yl}propanoic acid, Alcohol dehydrogenase class-3, ...
Authors:Chun, L, Kim, H, Sun, X.
Deposit date:2011-01-28
Release date:2011-04-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of s-nitrosoglutathione reductase inhibitors: potential agents for the treatment of asthma and other inflammatory diseases.
ACS Med Chem Lett, 2, 2011
1SQQ
DownloadVisualize
BU of 1sqq by Molmil
Crystal Structure Analysis of Bovine Bc1 with Methoxy Acrylate Stilbene (MOAS)
Descriptor: Cytochrome b, Cytochrome c1, heme protein, ...
Authors:Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
Deposit date:2004-03-19
Release date:2005-10-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex.
J.Mol.Biol., 341, 2004
1SQB
DownloadVisualize
BU of 1sqb by Molmil
Crystal Structure Analysis of Bovine Bc1 with Azoxystrobin
Descriptor: Cytochrome b, Cytochrome c1, heme protein, ...
Authors:Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
Deposit date:2004-03-18
Release date:2004-09-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex
J.Mol.Biol., 341, 2004
1SQP
DownloadVisualize
BU of 1sqp by Molmil
Crystal Structure Analysis of Bovine Bc1 with Myxothiazol
Descriptor: (2Z,6E)-7-{2'-[(2E,4E)-1,6-DIMETHYLHEPTA-2,4-DIENYL]-2,4'-BI-1,3-THIAZOL-4-YL}-3,5-DIMETHOXY-4-METHYLHEPTA-2,6-DIENAMID E, (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ...
Authors:Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
Deposit date:2004-03-19
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex.
J.Mol.Biol., 341, 2004
1SQV
DownloadVisualize
BU of 1sqv by Molmil
Crystal Structure Analysis of Bovine Bc1 with UHDBT
Descriptor: 6-HYDROXY-5-UNDECYL-1,3-BENZOTHIAZOLE-4,7-DIONE, Cytochrome b, Cytochrome c1, ...
Authors:Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
Deposit date:2004-03-19
Release date:2005-09-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex.
J.Mol.Biol., 341, 2004
1SQX
DownloadVisualize
BU of 1sqx by Molmil
Crystal Structure Analysis of Bovine Bc1 with Stigmatellin A
Descriptor: Cytochrome b, Cytochrome c1, heme protein, ...
Authors:Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
Deposit date:2004-03-21
Release date:2005-09-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex.
J.Mol.Biol., 341, 2004
1TAE
DownloadVisualize
BU of 1tae by Molmil
Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal
Descriptor: DNA ligase, NAD-dependent, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Gajiwala, K.S, Pinko, C.
Deposit date:2004-05-19
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal.
STRUCTURE, 12, 2004
6KA7
DownloadVisualize
BU of 6ka7 by Molmil
The complex structure of Human IgG Fc and its binding Repebody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin gamma-1 heavy chain, repebody
Authors:Choi, J, Kim, H.
Deposit date:2019-06-21
Release date:2020-06-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The complex structure of Human IgG Fc and its binding Repebody
To Be Published
6F9S
DownloadVisualize
BU of 6f9s by Molmil
Crystal structure of the C-terminal RecA domain of DDX6 in complex with a conserved peptide from LSM14
Descriptor: Cytokinesis, Apoptosis, RNA-associated, ...
Authors:Jinek, M, Brandmann, T.
Deposit date:2017-12-15
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Molecular architecture of LSM14 interactions involved in the assembly of mRNA silencing complexes.
EMBO J., 37, 2018
6F9W
DownloadVisualize
BU of 6f9w by Molmil
Crystal structure of the LSM domain of LSM14 in complex with a C-terminal peptide of 4E-T
Descriptor: Eukaryotic translation initiation factor 4E transporter, Protein LSM14 homolog A
Authors:Brandmann, T, Jinek, M.
Deposit date:2017-12-15
Release date:2018-03-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:Molecular architecture of LSM14 interactions involved in the assembly of mRNA silencing complexes.
EMBO J., 37, 2018
6KXV
DownloadVisualize
BU of 6kxv by Molmil
Crystal structure of a nucleosome containing Leishmania histone H3
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Dacher, M, Taguchi, H, Kujirai, T, Kurumizaka, H.
Deposit date:2019-09-13
Release date:2020-07-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.63 Å)
Cite:Incorporation and influence of Leishmania histone H3 in chromatin.
Nucleic Acids Res., 47, 2019
5X7X
DownloadVisualize
BU of 5x7x by Molmil
The crystal structure of the nucleosome containing H3.3 at 2.18 angstrom resolution
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
Authors:Arimura, Y, Taguchi, H, Kurumizaka, H.
Deposit date:2017-02-27
Release date:2017-04-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.184 Å)
Cite:Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
5XM1
DownloadVisualize
BU of 5xm1 by Molmil
The mouse nucleosome structure containing H2A, H2B type3-A, H3mm7, and H4
Descriptor: DNA (146-MER), Histone H2A type 1-B, Histone H2B type 3-A, ...
Authors:Taguchi, H, Horikoshi, N, Kurumizaka, H.
Deposit date:2017-05-12
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration.
Nat Commun, 9, 2018
6FDL
DownloadVisualize
BU of 6fdl by Molmil
Crystal structure of the NYN domain of human MARF1
Descriptor: Meiosis regulator and mRNA stability factor 1
Authors:Jinek, M, Brandmann, T.
Deposit date:2017-12-26
Release date:2018-11-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Human MARF1 is an endoribonuclease that interacts with the DCP1:2 decapping complex and degrades target mRNAs.
Nucleic Acids Res., 46, 2018
5B3N
DownloadVisualize
BU of 5b3n by Molmil
The crystal structure of anti-H4K20me1_scFv, 15F11
Descriptor: anti-H4K20me1_scFv
Authors:Kujirai, T, Horikoshi, N, Kurumizaka, H.
Deposit date:2016-03-04
Release date:2016-09-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A Genetically Encoded Probe for Live-Cell Imaging of H4K20 Monomethylation
J.Mol.Biol., 428, 2016
5GXQ
DownloadVisualize
BU of 5gxq by Molmil
The crystal structure of the nucleosome containing H3.6
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Taguchi, H, Xie, Y, Horikoshi, N, Kurumizaka, H.
Deposit date:2016-09-19
Release date:2017-04-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
5B1M
DownloadVisualize
BU of 5b1m by Molmil
The mouse nucleosome structure containing H3.1
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B type 3-A, ...
Authors:Urahama, T, Machida, S, Horikoshi, N, Osakabe, A, Tachiwana, H, Taguchi, H, Kurumizaka, H.
Deposit date:2015-12-08
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
Cell Rep, 18, 2017
5B1L
DownloadVisualize
BU of 5b1l by Molmil
The mouse nucleosome structure containing H3t
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A type 1, ...
Authors:Urahama, T, Machida, S, Horikoshi, N, Osakabe, A, Tachiwana, H, Taguchi, H, Kurumizaka, H.
Deposit date:2015-12-08
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
Cell Rep, 18, 2017
5XM0
DownloadVisualize
BU of 5xm0 by Molmil
The mouse nucleosome structure containing H2A, H2B type3-A, H3.3, and H4
Descriptor: DNA (146-MER), Histone H2A type 1-B, Histone H2B type 3-A, ...
Authors:Taguchi, H, Horikoshi, N, Kurumizaka, H.
Deposit date:2017-05-12
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.874 Å)
Cite:Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration.
Nat Commun, 9, 2018
3WYK
DownloadVisualize
BU of 3wyk by Molmil
Crystal structure of the catalytic domain of PDE10A complexed with 3-(1-phenyl-1H-pyrazol-5-yl)-1-(3-(trifluoromethyl)phenyl)pyridazin-4(1H)-one
Descriptor: 3-(1-phenyl-1H-pyrazol-5-yl)-1-[3-(trifluoromethyl)phenyl]pyridazin-4(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Oki, H, Hayano, Y.
Deposit date:2014-09-01
Release date:2014-11-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of 1-[2-fluoro-4-(1H-pyrazol-1-yl)phenyl]-5-methoxy-3-(1-phenyl-1H-pyrazol-5-yl)pyridazin-4(1H)-one (TAK-063), a highly potent, selective, and orally active phosphodiesterase 10A (PDE10A) inhibitor.
J.Med.Chem., 57, 2014
3WYL
DownloadVisualize
BU of 3wyl by Molmil
Crystal structure of the catalytic domain of PDE10A complexed with 5-methoxy-3-(1-phenyl-1H-pyrazol-5-yl)-1-(3-(trifluoromethyl)phenyl)pyridazin-4(1H)-one
Descriptor: 5-methoxy-3-(1-phenyl-1H-pyrazol-5-yl)-1-[3-(trifluoromethyl)phenyl]pyridazin-4(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Oki, H, Hayano, Y.
Deposit date:2014-09-01
Release date:2014-11-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery of 1-[2-fluoro-4-(1H-pyrazol-1-yl)phenyl]-5-methoxy-3-(1-phenyl-1H-pyrazol-5-yl)pyridazin-4(1H)-one (TAK-063), a highly potent, selective, and orally active phosphodiesterase 10A (PDE10A) inhibitor.
J.Med.Chem., 57, 2014

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon