5X7X

The crystal structure of the nucleosome containing H3.3 at 2.18 angstrom resolution

Summary for 5X7X

DescriptorHistone H3.3, Histone H4, Histone H2A type 1-B/E, ... (8 entities in total)
Functional Keywordschromatin, nucleosome, histone variant, structural protein-dna complex, structural protein/dna
Biological sourceHomo sapiens (Human)
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Cellular locationNucleus P84243 P62805 P04908 P06899
Total number of polymer chains10
Total molecular weight202934.33
Authors
Arimura, Y.,Taguchi, H.,Kurumizaka, H. (deposition date: 2017-02-27, release date: 2017-04-19, Last modification date: 2017-10-18)
Primary citation
Taguchi, H.,Xie, Y.,Horikoshi, N.,Maehara, K.,Harada, A.,Nogami, J.,Sato, K.,Arimura, Y.,Osakabe, A.,Kujirai, T.,Iwasaki, T.,Semba, Y.,Tachibana, T.,Kimura, H.,Ohkawa, Y.,Kurumizaka, H.
Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56:2184-2196, 2017
PubMed: 28374988 (PDB entries with the same primary citation)
DOI: 10.1021/acs.biochem.6b01098
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.184 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.257700.6%2.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution