Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X7X

The crystal structure of the nucleosome containing H3.3 at 2.18 angstrom resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Histone H3.3polymer13915643.32UniProt (P84243)
Pfam (PF00125)
Homo sapiens (Human)
2B, F
(B, F)
Histone H4polymer10611676.72UniProt (P62805)
Pfam (PF15511)
Homo sapiens (Human)
3C, G
(C, G)
Histone H2A type 1-B/Epolymer13314447.82UniProt (P04908)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (Human)Histone H2A.2,Histone H2A/a,Histone H2A/m
4D, H
(D, H)
Histone H2B type 1-Jpolymer12914217.52UniProt (P06899)
Pfam (PF00125)
Homo sapiens (Human)Histone H2B.1,Histone H2B.r,H2B/r
5I, J
(I, J)
DNA (146-MER)polymer14645053.92Homo sapiens
6K, L, M, O
(A, C, E, G)
CHLORIDE IONnon-polymer35.54Chemie (CL)
7AA, N, P, Q, R...
(J, E, I)
MANGANESE (II) IONnon-polymer54.913Chemie (MN)
8BA, CA, DA, EA, FA...
(A, B, C, D, E...)
waterwater18.0436Chemie (HOH)
Sequence modifications
A, E: 0 - 135 (UniProt: P84243)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
B, F: 0 - 102 (UniProt: P62805)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
C, G: 0 - 129 (UniProt: P04908)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
D, H: 0 - 125 (UniProt: P06899)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight202078.3
Non-Polymers*Number of molecules17
Total formula weight856.0
All*Total formula weight202934.3
*Water molecules are not included.

238268

PDB entries from 2025-07-02

PDB statisticsPDBj update infoContact PDBjnumon