Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2GRK
DownloadVisualize
BU of 2grk by Molmil
Crystal structure of ectromelia virus EVM1 chemokine binding protein
Descriptor: EVM001
Authors:Arnold, P.L, Fremont, D.H.
Deposit date:2006-04-24
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural determinants of chemokine binding by an ectromelia virus-encoded decoy receptor.
J.Virol., 80, 2006
2KX6
DownloadVisualize
BU of 2kx6 by Molmil
Signaling state of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Ramachandran, P.L, Lovett, J.E, Carl, P.J, Cammarata, M, Lee, J.H, Yang, J.O, Ihee, H, Timmel, C.R, van Thor, J.
Deposit date:2010-04-27
Release date:2011-06-15
Last modified:2012-07-18
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:The short-lived signaling state of the photoactive yellow protein photoreceptor revealed by combined structural probes.
J.Am.Chem.Soc., 133, 2011
5TIN
DownloadVisualize
BU of 5tin by Molmil
Crystal Structure of Human Glycine Receptor alpha-3 Mutant N38Q Bound to AM-3607
Descriptor: (3S,3aS,9bS)-2-[(2H-1,3-benzodioxol-5-yl)sulfonyl]-3,5-dimethyl-1,2,3,3a,5,9b-hexahydro-4H-pyrrolo[3,4-c][1,6]naphthyridin-4-one, CHLORIDE ION, GLYCINE, ...
Authors:Shaffer, P.L, Huang, X, Chen, H.
Deposit date:2016-10-03
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal Structures of Human GlyRa3 Bound to a Novel Class of Potentiators with Efficacy in a Mouse Model of Neuropathic Pain
To Be Published
5TSG
DownloadVisualize
BU of 5tsg by Molmil
PilB from Geobacter metallireducens bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FORMIC ACID, MAGNESIUM ION, ...
Authors:McCallum, M, Tammam, S, Khan, A, Burrows, L, Howell, P.L.
Deposit date:2016-10-28
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.4011 Å)
Cite:The molecular mechanism of the type IVa pilus motors.
Nat Commun, 8, 2017
1U16
DownloadVisualize
BU of 1u16 by Molmil
Crystal structure of a duck-delta-crystallin-1 double loop mutant (DLM) in complex with sulfate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Delta crystallin I, ...
Authors:Tsai, M, Sampaleanu, L.M, Greene, C, Creagh, L, Haynes, C, Howell, P.L.
Deposit date:2004-07-14
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A duck delta1 crystallin double loop mutant provides insight into residues important for argininosuccinate lyase activity.
Biochemistry, 43, 2004
1U15
DownloadVisualize
BU of 1u15 by Molmil
Crystal structure of a duck-delta-crystallin-1 double loop mutant (DLM)
Descriptor: Delta crystallin I
Authors:Tsai, M, Sampaleanu, L.M, Greene, C, Creagh, L, Haynes, C, Howell, P.L.
Deposit date:2004-07-14
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A duck delta1 crystallin double loop mutant provides insight into residues important for argininosuccinate lyase activity.
Biochemistry, 43, 2004
5UCY
DownloadVisualize
BU of 5ucy by Molmil
Cryo-EM map of protofilament of microtubule doublet
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ichikawa, M, Liu, D, Kastritis, P.L, Basu, K, Bui, K.H.
Deposit date:2016-12-22
Release date:2017-05-10
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Subnanometre-resolution structure of the doublet microtubule reveals new classes of microtubule-associated proteins.
Nat Commun, 8, 2017
5UG1
DownloadVisualize
BU of 5ug1 by Molmil
Structure of Streptococcus pneumoniae peptidoglycan O-acetyltransferase A (OatA) C-terminal catalytic domain with methylsulfonyl adduct
Descriptor: Acyltransferase, SODIUM ION, methanesulfonic acid
Authors:Sychantha, D, Jones, C, Little, D.J, Moynihan, P.J, Robinson, H, Galley, N.F, Roper, D.I, Dowson, C.G, Howell, P.L, Clarke, A.J.
Deposit date:2017-01-06
Release date:2017-10-25
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:In vitro characterization of the antivirulence target of Gram-positive pathogens, peptidoglycan O-acetyltransferase A (OatA).
PLoS Pathog., 13, 2017
5UFY
DownloadVisualize
BU of 5ufy by Molmil
Structure of Streptococcus pneumoniae peptidoglycan O-acetyltransferase A (OatA) C-terminal catalytic domain
Descriptor: Acyltransferase, SODIUM ION
Authors:Sychantha, D, Jones, C, Little, D.J, Moynihan, P.J, Robinson, H, Galley, N.F, Roper, D.I, Dowson, C.G, Howell, P.L, Clarke, A.J.
Deposit date:2017-01-06
Release date:2017-10-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:In vitro characterization of the antivirulence target of Gram-positive pathogens, peptidoglycan O-acetyltransferase A (OatA).
PLoS Pathog., 13, 2017
1S4O
DownloadVisualize
BU of 1s4o by Molmil
Crystal structure of yeast alpha1,2-mannosyltransferase Kre2p/Mnt1p: binary complex with GDP/Mn
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Lobsanov, Y.D, Romero, P.A, Sleno, B, Yu, B, Yip, P, Herscovics, A, Howell, P.L.
Deposit date:2004-01-16
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of Kre2p/Mnt1p: A YEAST {alpha}1,2-MANNOSYLTRANSFERASE INVOLVED IN MANNOPROTEIN BIOSYNTHESIS
J.Biol.Chem., 279, 2004
5UVR
DownloadVisualize
BU of 5uvr by Molmil
The core region of PilO from the type IV pilus system of Pseudomonas aeruginosa
Descriptor: PilO protein
Authors:Howell, P.L, Junop, M.S.
Deposit date:2017-02-20
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conserved, unstructured regions in Pseudomonas aeruginosa PilO are important for type IVa pilus function.
Sci Rep, 8, 2018
5VDH
DownloadVisualize
BU of 5vdh by Molmil
Crystal Structure of Human Glycine Receptor alpha-3 Bound to AM-3607, Glycine, and Ivermectin
Descriptor: (2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-6'-[(2S)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside, (3S,3aS,9bS)-2-[(2H-1,3-benzodioxol-5-yl)sulfonyl]-3,5-dimethyl-1,2,3,3a,5,9b-hexahydro-4H-pyrrolo[3,4-c][1,6]naphthyridin-4-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shaffer, P.L, Huang, X, Chen, H.
Deposit date:2017-04-03
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structures of Human GlyR alpha 3 Bound to Ivermectin.
Structure, 25, 2017
5TSH
DownloadVisualize
BU of 5tsh by Molmil
PilB from Geobacter metallireducens bound to AMP-PNP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:McCallum, M, Tammam, S, Khan, A, Burrows, L, Howell, P.L.
Deposit date:2016-10-28
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The molecular mechanism of the type IVa pilus motors.
Nat Commun, 8, 2017
1RGQ
DownloadVisualize
BU of 1rgq by Molmil
M9A HCV Protease complex with pentapeptide keto-amide inhibitor
Descriptor: N-(PYRAZIN-2-YLCARBONYL)LEUCYLISOLEUCYL-N~1~-{1-[2-({1-CARBOXY-2-[4-(PHOSPHONOOXY)PHENYL]ETHYL}AMINO)-1,1-DIHYDROXY-2-OXOETHYL]BUT-3-ENYL}-3-CYCLOHEXYLALANINAMIDE, NS3 Protease, NS4A peptide, ...
Authors:Liu, Y, Stoll, V.S, Richardson, P.L, Saldivar, A, Klaus, J.L, Molla, A, Kohlbrenner, W, Kati, W.M.
Deposit date:2003-11-12
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hepatitis C NS3 protease inhibition by peptidyl-alpha-ketoamide inhibitors: kinetic mechanism and structure.
Arch.Biochem.Biophys., 421, 2004
5VJS
DownloadVisualize
BU of 5vjs by Molmil
De Novo Photosynthetic Reaction Center Protein Equipped with Heme B, a synthetic Zn porphyrin, and Zn(II) cations
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Reaction Center Maquette, ...
Authors:Ennist, N.M, Dutton, P.L, Stayrook, S.E, Moser, C.C.
Deposit date:2017-04-19
Release date:2018-04-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:De novo protein design of photochemical reaction centers.
Nat Commun, 13, 2022
5VJT
DownloadVisualize
BU of 5vjt by Molmil
De Novo Photosynthetic Reaction Center Protein Equipped with Heme B and Zn(II) cations
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Reaction Center Maquette, ...
Authors:Ennist, N.M, Stayrook, S.E, Dutton, P.L, Moser, C.C.
Deposit date:2017-04-19
Release date:2018-04-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:De novo protein design of photochemical reaction centers.
Nat Commun, 13, 2022
5UBQ
DownloadVisualize
BU of 5ubq by Molmil
Cryo-EM structure of ciliary microtubule doublet
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ichikawa, M, Liu, D, Kastritis, P.L, Basu, K, Bui, K.H.
Deposit date:2016-12-21
Release date:2017-05-10
Last modified:2020-01-15
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Subnanometre-resolution structure of the doublet microtubule reveals new classes of microtubule-associated proteins.
Nat Commun, 8, 2017
1SD1
DownloadVisualize
BU of 1sd1 by Molmil
STRUCTURE OF HUMAN 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE COMPLEXED WITH FORMYCIN A
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 5'-methylthioadenosine phosphorylase
Authors:Lee, J.E, Settembre, E.C, Cornell, K.A, Riscoe, M.K, Sufrin, J.R, Ealick, S.E, Howell, P.L.
Deposit date:2004-02-12
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural Comparison of MTA Phosphorylase and MTA/AdoHcy Nucleosidase Explains Substrate Preferences and Identifies Regions Exploitable for Inhibitor Design.
Biochemistry, 43, 2004
1SD2
DownloadVisualize
BU of 1sd2 by Molmil
STRUCTURE OF HUMAN 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE COMPLEXED WITH 5'-METHYLTHIOTUBERCIDIN
Descriptor: 2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-METHYLSULFANYLMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, 5'-methylthioadenosine phosphorylase, SULFATE ION
Authors:Lee, J.E, Settembre, E.C, Cornell, K.A, Riscoe, M.K, Sufrin, J.R, Ealick, S.E, Howell, P.L.
Deposit date:2004-02-12
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Comparison of MTA Phosphorylase and MTA/AdoHcy Nucleosidase Explains Substrate Preferences and Identifies Regions Exploitable for Inhibitor Design.
Biochemistry, 43, 2004
5V8E
DownloadVisualize
BU of 5v8e by Molmil
Structure of Bacillus cereus PatB1
Descriptor: Bacillus cereus PatB1, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Sychantha, D, Little, D.J, Chapman, R.N, Boons, G.J, Robinson, H, Howell, P.L, Clarke, A.J.
Deposit date:2017-03-21
Release date:2017-10-18
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PatB1 is an O-acetyltransferase that decorates secondary cell wall polysaccharides.
Nat. Chem. Biol., 14, 2018
5VDI
DownloadVisualize
BU of 5vdi by Molmil
Crystal Structure of Human Glycine Receptor alpha-3 Mutant N38Q Bound to AM-3607, Glycine, and Ivermectin
Descriptor: (2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-6'-[(2S)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside, (3S,3aS,9bS)-2-[(2H-1,3-benzodioxol-5-yl)sulfonyl]-3,5-dimethyl-1,2,3,3a,5,9b-hexahydro-4H-pyrrolo[3,4-c][1,6]naphthyridin-4-one, GLYCINE, ...
Authors:Shaffer, P.L, Huang, X, Chen, H.
Deposit date:2017-04-03
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structures of Human GlyR alpha 3 Bound to Ivermectin.
Structure, 25, 2017
1S4N
DownloadVisualize
BU of 1s4n by Molmil
Crystal structure of yeast alpha1,2-mannosyltransferase Kre2p/Mnt1p
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Lobsanov, Y.D, Romero, P.A, Sleno, B, Yu, B, Yip, P, Herscovics, A, Howell, P.L.
Deposit date:2004-01-16
Release date:2004-05-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of Kre2p/Mnt1p: A YEAST {alpha}1,2-MANNOSYLTRANSFERASE INVOLVED IN MANNOPROTEIN BIOSYNTHESIS
J.Biol.Chem., 279, 2004
1S4P
DownloadVisualize
BU of 1s4p by Molmil
Crystal structure of yeast alpha1,2-mannosyltransferase Kre2p/Mnt1p: ternary complex with GDP/Mn and methyl-alpha-mannoside acceptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Lobsanov, Y.D, Romero, P.A, Sleno, B, Yu, B, Yip, P, Herscovics, A, Howell, P.L.
Deposit date:2004-01-16
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of Kre2p/Mnt1p: A YEAST {alpha}1,2-MANNOSYLTRANSFERASE INVOLVED IN MANNOPROTEIN BIOSYNTHESIS
J.Biol.Chem., 279, 2004
1TC6
DownloadVisualize
BU of 1tc6 by Molmil
Ligand Induced Conformational Shift in the N-terminal Domain of GRP94, Open Conformation ADP-Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Endoplasmin, MAGNESIUM ION, ...
Authors:Gewirth, D.T, Immormino, R.M, Dollins, D.E, Shaffer, P.L, Walker, M.A, Soldano, K.L.
Deposit date:2004-05-20
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Ligand-induced Conformational Shift in the N-terminal Domain of GRP94, an Hsp90 Chaperone.
J.Biol.Chem., 279, 2004
5V8D
DownloadVisualize
BU of 5v8d by Molmil
Structure of Bacillus cereus PatB1 with sulfonyl adduct
Descriptor: Bacillus cereus PatB1, SULFATE ION
Authors:Sychantha, D, Little, D.J, Chapman, R.N, Boons, G.J, Robinson, H, Howell, P.L, Clarke, A.J.
Deposit date:2017-03-21
Release date:2017-10-18
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:PatB1 is an O-acetyltransferase that decorates secondary cell wall polysaccharides.
Nat. Chem. Biol., 14, 2018

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon