Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3N52
DownloadVisualize
BU of 3n52 by Molmil
crystal Structure analysis of MIP2
Descriptor: C-X-C motif chemokine 2
Authors:Rajasekaran, D.
Deposit date:2010-05-24
Release date:2011-06-08
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Model of GAG/MIP-2/CXCR2 Interfaces and Its Functional Effects.
Biochemistry, 51, 2012
8RFA
DownloadVisualize
BU of 8rfa by Molmil
Arginase 2 in complex with an inhibitor
Descriptor: Arginase-2, mitochondrial, MANGANESE (II) ION, ...
Authors:Petersen, J.
Deposit date:2023-12-12
Release date:2024-11-27
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Discovery of (2 R ,4 R )-4-(( S )-2-Amino-3-methylbutanamido)-2-(4-boronobutyl)pyrrolidine-2-carboxylic Acid (AZD0011), an Actively Transported Prodrug of a Potent Arginase Inhibitor to Treat Cancer.
J.Med.Chem., 67, 2024
6J1L
DownloadVisualize
BU of 6j1l by Molmil
Crystal Structure Analysis of the ROR gamma(C455E)
Descriptor: 2-[4-(ethylsulfonyl)phenyl]-N-[2'-fluoro-4'-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)[1,1'-biphenyl]-4-yl]acetamide, Nuclear receptor ROR-gamma
Authors:zhang, Y, Li, C.C, wu, X.S.
Deposit date:2018-12-28
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery and Characterization of XY101, a Potent, Selective, and Orally Bioavailable ROR gamma Inverse Agonist for Treatment of Castration-Resistant Prostate Cancer.
J.Med.Chem., 62, 2019
8YJY
DownloadVisualize
BU of 8yjy by Molmil
Cryo-EM Structure of CdnG-E2 complex from Serratia marcescens
Descriptor: SmCdnG, Type VI secretion protein
Authors:Xiao, J, Wang, L.
Deposit date:2024-03-03
Release date:2024-05-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Phage defence system CBASS is regulated by a prokaryotic E2 enzyme that imitates the ubiquitin pathway.
Nat Microbiol, 9, 2024
9JJD
DownloadVisualize
BU of 9jjd by Molmil
Structural analysis of autophagy-related protein 8a in Drosophila melanogaster
Descriptor: Autophagy-related 8a, isoform A
Authors:Zhang, S.Q, Luo, X, Wu, D.X, Liu, J, Li, X.Y.
Deposit date:2024-09-13
Release date:2025-03-26
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal Structure of Autophagy-Associated Protein 8 at 1.36 angstrom Resolution and Its Inhibitory Interactions with Indole Analogs.
J.Agric.Food Chem., 73, 2025
6CN3
DownloadVisualize
BU of 6cn3 by Molmil
Crystal structure of zebrafish Phosphatidylinositol-4-phosphate 5- kinase alpha isoform D236A
Descriptor: Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
Authors:Zeng, X, Sui, D, Hu, J.
Deposit date:2018-03-07
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.351 Å)
Cite:Structural insights into lethal contractural syndrome type 3 (LCCS3) caused by a missense mutation of PIP5K gamma.
Biochem. J., 475, 2018
6RVV
DownloadVisualize
BU of 6rvv by Molmil
Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.
Descriptor: GOLD ION, Transcription attenuation protein MtrB
Authors:Malay, A.D, Miyazaki, N, Biela, A.P, Iwasaki, K, Heddle, J.G.
Deposit date:2019-06-03
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ultra-stable gold-coordinated protein cage displaying reversible assembly.
Nature, 569, 2019
6CMW
DownloadVisualize
BU of 6cmw by Molmil
Crystal structure of zebrafish Phosphatidylinositol-4-phosphate 5- kinase alpha isoform with bound ATP/Ca2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Phosphatidylinositol-4-phosphate 5-kinase, ...
Authors:Zeng, X, Sui, D, Hu, J.
Deposit date:2018-03-06
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural insights into lethal contractural syndrome type 3 (LCCS3) caused by a missense mutation of PIP5K gamma.
Biochem. J., 475, 2018
8K0B
DownloadVisualize
BU of 8k0b by Molmil
Cryo-EM structure of TMEM63C
Descriptor: Calcium permeable stress-gated cation channel 1
Authors:Qin, Y, Yu, D, Dong, J, Dang, S.
Deposit date:2023-07-08
Release date:2023-12-06
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Cryo-EM structure of TMEM63C suggests it functions as a monomer.
Nat Commun, 14, 2023
6RVW
DownloadVisualize
BU of 6rvw by Molmil
Structure of right-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.
Descriptor: GOLD ION, Transcription attenuation protein MtrB
Authors:Malay, A.D, Miyazaki, N, Biela, A.P, Iwasaki, K, Heddle, J.G.
Deposit date:2019-06-03
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ultra-stable gold-coordinated protein cage displaying reversible assembly.
Nature, 569, 2019
7N9L
DownloadVisualize
BU of 7n9l by Molmil
KirBac3.1 C71S C262S
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Inward rectifier potassium channel Kirbac3.1, POTASSIUM ION, ...
Authors:Gulbis, J.M, Black, K.A.
Deposit date:2021-06-18
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ion currents through Kir potassium channels are gated by anionic lipids.
Nat Commun, 13, 2022
5IWL
DownloadVisualize
BU of 5iwl by Molmil
CD47-diabody complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5F9 diabody, Leukocyte surface antigen CD47, ...
Authors:Di, W, Jude, K.M, Garcia, K.C.
Deposit date:2016-03-22
Release date:2016-06-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:CD47-blocking immunotherapies stimulate macrophage-mediated destruction of small-cell lung cancer.
J.Clin.Invest., 126, 2016
6CN2
DownloadVisualize
BU of 6cn2 by Molmil
Crystal structure of zebrafish Phosphatidylinositol-4-phosphate 5- kinase alpha isoform D236N with bound ATP/Ca2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Phosphatidylinositol-4-phosphate 5-kinase, ...
Authors:Zeng, X, Sui, D, Hu, J.
Deposit date:2018-03-07
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Structural insights into lethal contractural syndrome type 3 (LCCS3) caused by a missense mutation of PIP5K gamma.
Biochem. J., 475, 2018
7N9K
DownloadVisualize
BU of 7n9k by Molmil
KirBac3.1 L124M mutant
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Inward rectifier potassium channel Kirbac3.1, N-OCTANE, ...
Authors:Black, T.A, Gulbis, J.M.
Deposit date:2021-06-18
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Ion currents through Kir potassium channels are gated by anionic lipids.
Nat Commun, 13, 2022
7CCH
DownloadVisualize
BU of 7cch by Molmil
Acinetobacter baumannii histidine kinase AdeS
Descriptor: AdeS
Authors:Wen, Y, Felix, J.
Deposit date:2020-06-17
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.848 Å)
Cite:Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS.
Iscience, 24, 2021
7CCI
DownloadVisualize
BU of 7cci by Molmil
Acinetobacter baumannii response regulator AdeR with disordered N terminus
Descriptor: AdeR, MAGNESIUM ION
Authors:Wen, Y.
Deposit date:2020-06-17
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS.
Iscience, 24, 2021
7X4E
DownloadVisualize
BU of 7x4e by Molmil
Structure of 10635-DndE
Descriptor: DNA sulfur modification protein DndE, GLYCEROL
Authors:Haiyan, G, Wei, H, Chen, S, Wang, L, Wu, G.
Deposit date:2022-03-02
Release date:2022-04-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and Functional Analysis of DndE Involved in DNA Phosphorothioation in the Haloalkaliphilic Archaea Natronorubrum bangense JCM10635.
Mbio, 13, 2022
9J7V
DownloadVisualize
BU of 9j7v by Molmil
Human G6PC1 in apo state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Glucose-6-phosphatase catalytic subunit 1
Authors:Jiang, D.H, Xia, Z.Y.
Deposit date:2024-08-19
Release date:2025-02-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into glucose-6-phosphate recognition and hydrolysis by human G6PC1.
Proc.Natl.Acad.Sci.USA, 122, 2025
9J7U
DownloadVisualize
BU of 9j7u by Molmil
H176A mutant of human G6PC1 in complex with G6P
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 6-O-phosphono-beta-D-glucopyranose, Glucose-6-phosphatase catalytic subunit 1
Authors:Jiang, D.H, Xia, Z.Y.
Deposit date:2024-08-19
Release date:2025-02-05
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural insights into glucose-6-phosphate recognition and hydrolysis by human G6PC1.
Proc.Natl.Acad.Sci.USA, 122, 2025
6OQT
DownloadVisualize
BU of 6oqt by Molmil
E. coli ATP synthase State 1c
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2019-04-29
Release date:2020-06-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6IJX
DownloadVisualize
BU of 6ijx by Molmil
Crystal Structure of AKR1C1 complexed with meclofenamic acid
Descriptor: 2-[(2,6-dichloro-3-methyl-phenyl)amino]benzoic acid, Aldo-keto reductase family 1 member C1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zheng, X, Zhao, Y, Zhang, L, Zhang, H, Chen, Y, Hu, X.
Deposit date:2018-10-12
Release date:2019-10-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Screening, synthesis, crystal structure, and molecular basis of 6-amino-4-phenyl-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitriles as novel AKR1C3 inhibitors.
Bioorg.Med.Chem., 26, 2018
6PQV
DownloadVisualize
BU of 6pqv by Molmil
E. coli ATP Synthase State 1e
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2019-07-10
Release date:2020-06-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6OQS
DownloadVisualize
BU of 6oqs by Molmil
E. coli ATP synthase State 1b
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2019-04-29
Release date:2020-06-03
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6OQW
DownloadVisualize
BU of 6oqw by Molmil
E. coli ATP synthase State 3a
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2019-04-29
Release date:2020-06-24
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6A7B
DownloadVisualize
BU of 6a7b by Molmil
AKR1C3 complexed with new inhibitor with novel scaffold
Descriptor: (4R)-6-amino-4-(4-hydroxy-3-methoxy-5-nitrophenyl)-3-propyl-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile, Aldo-keto reductase family 1 member C3, DIMETHYLFORMAMIDE, ...
Authors:Zheng, X, Zhao, Y, Zhang, H, Chen, Y.
Deposit date:2018-07-02
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Screening, synthesis, crystal structure, and molecular basis of 6-amino-4-phenyl-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitriles as novel AKR1C3 inhibitors.
Bioorg.Med.Chem., 26, 2018

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon