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9QU1

Crystal structure of the human RalGAPA2 N-terminal domain with human kappaB-Ras1

Summary for 9QU1
Entry DOI10.2210/pdb9qu1/pdb
DescriptorRal GTPase-activating protein subunit alpha-2, NF-kappa-B inhibitor-interacting Ras-like protein 1, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... (5 entities in total)
Functional Keywordsral, gtpase, ralgap, kb-ras, signaling protein
Biological sourceHomo sapiens (human)
More
Total number of polymer chains4
Total formula weight100570.02
Authors
Rasche, R.,Kuemmel, D. (deposition date: 2025-04-09, release date: 2025-07-16)
Primary citationRasche, R.,Apken, L.H.,Titze, S.,Michalke, E.,Singh, R.K.,Oeckinghaus, A.,Kummel, D.
The GTPase kappa B-Ras is an essential subunit of the RalGAP tumor suppressor complex.
J.Biol.Chem., :110460-110460, 2025
Cited by
PubMed Abstract: κB-Ras1 and κB-Ras2 are small GTPases with non-canonical features that act as tumor suppressors downstream of Ras. Via interaction with the RalGAP (GTPase activating protein) complex, they limit activity of Ral GTPases and restrict anchorage-independent proliferation. We here present the crystal structure of κB-Ras1 in complex with the N-terminal domain of RGα2. The structure suggests a mechanism of intrinsic GTP hydrolysis of κB-Ras1 that relies on a scaffolding function of the GTPase rather than on catalytic residues, which we confirm by mutational analysis. The interaction with RGα2 is nucleotide-independent and does not involve κB-Ras1 switch regions, which establishes κB-Ras proteins as a constitutive third subunit of RalGAP complexes. Functional studies demonstrate that κB-Ras proteins are not required for RalGAP catalytic activity in vitro, but for functionality in vivo. We propose that κB-Ras may thus act as regulator of RalGAP localization and thereby control the Ras/Ral signaling pathway.
PubMed: 40619001
DOI: 10.1016/j.jbc.2025.110460
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.72 Å)
Structure validation

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PDB entries from 2025-07-16

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