9QU1
Crystal structure of the human RalGAPA2 N-terminal domain with human kappaB-Ras1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-08-28 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 0.68879 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 163.564, 63.430, 104.163 |
| Unit cell angles | 90.00, 91.26, 90.00 |
Refinement procedure
| Resolution | 63.630 - 2.720 |
| R-factor | 0.1976 |
| Rwork | 0.195 |
| R-free | 0.25300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.529 |
| Data reduction software | XDS (BUILT=20220820) |
| Data scaling software | Aimless (0.7.7) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 104.138 | 2.959 |
| High resolution limit [Å] | 2.716 | 2.716 |
| Rmerge | 0.114 | 1.202 |
| Rmeas | 0.125 | 1.363 |
| Rpim | 0.052 | 0.632 |
| Number of reflections | 21842 | 1093 |
| <I/σ(I)> | 10.2 | |
| Completeness [%] | 91.5 | 57.9 |
| Redundancy | 5.56 | 4.56 |
| CC(1/2) | 0.997 | 0.508 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 277 | 17 % PEG 3350 20 % glycerol 0.1 M MgCl2 1 ul protei + 1 ul screening buffer + 1 ul seed seed (1:200) |






