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9NU8

Structure of MurJ in complex with single gene lysis protein from phage Changjiang3

Summary for 9NU8
Entry DOI10.2210/pdb9nu8/pdb
Related9NU4 9NU5
EMDB information49796 49797 49798
DescriptorLipid II flippase MurJ, Lysis protein (2 entities in total)
Functional Keywordslipid ii flippase, phage single gene lysis proteins, peptidoglycan biosynthesis, transport protein
Biological sourceEscherichia coli K-12
More
Total number of polymer chains2
Total formula weight73993.07
Authors
Li, Y.E.,Clemons, W.M. (deposition date: 2025-03-19, release date: 2026-02-11, Last modification date: 2026-03-11)
Primary citationLi, Y.E.,Antillon, S.F.,Baron, G.F.,Chamakura, K.,Young, R.,Clemons Jr., W.M.
Convergent MurJ flippase inhibition by phage lysis proteins.
Nature, 2026
Cited by
PubMed Abstract: Antimicrobial drug resistance poses a global health challenge that necessitates the identification of new druggable targets. The essential lipid II flippase MurJ is a promising yet underexplored antimicrobial target in bacterial cell wall biosynthesis. The only known inhibitors of Gram-negative (diderm) MurJ are the single-gene lysis proteins (Sgls) from the lytic single-strand RNA phages M (Sgl) and PP7 (Sgl). Sgl and Sgl have distinct evolutionary origins and share no sequence similarity. Here we describe a common mechanism of MurJ inhibition by these phage-encoded Sgls. We determined the structures of MurJ-bound Sgl and Sgl and discovered a third distinct MurJ-targeting Sgl from the predicted phage Changjiang3 (Sgl) that we also characterized structurally. Our findings demonstrate that all three Sgls evolved convergently to trap MurJ in a periplasm-open conformation through a common MurJ interface, revealing a pathway for drug design.
PubMed: 41741639
DOI: 10.1038/s41586-026-10163-w
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.6 Å)
Structure validation

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