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9IP2

Cryo-EM structure of the RNA-dependent RNA polymerase complex from Marburg virus

Summary for 9IP2
Entry DOI10.2210/pdb9ip2/pdb
EMDB information60755
DescriptorRNA-directed RNA polymerase L,Maltose/maltodextrin-binding periplasmic protein, Maltose/maltodextrin-binding periplasmic protein,Polymerase cofactor VP35, ZINC ION (3 entities in total)
Functional Keywordsrna-dependent rna polymerase complex, viral protein
Biological sourceMarburg virus - Musoke, Kenya, 1980
More
Total number of polymer chains5
Total formula weight633552.91
Authors
Li, G.,Du, T.,Wang, J.,Wu, S.,Ru, H. (deposition date: 2024-07-10, release date: 2025-04-09, Last modification date: 2025-04-16)
Primary citationLi, G.,Du, T.,Wang, J.,Jie, K.,Ren, Z.,Zhang, X.,Zhang, L.,Wu, S.,Ru, H.
Structural insights into the RNA-dependent RNA polymerase complexes from highly pathogenic Marburg and Ebola viruses.
Nat Commun, 16:3080-3080, 2025
Cited by
PubMed Abstract: The Ebola and the Marburg viruses belong to the Filoviridae family, a group of filamentous, single-stranded, negative-sensed RNA viruses. Upon infection, uncontrolled propagation of the Ebola and the Marburg viruses causes severe hemorrhagic fevers with high mortality rates. The replication and transcription of viral genomes are mediated by a polymerase complex consisting of two proteins: L and its cofactor VP35. However, the molecular mechanism of filovirus RNA synthesis remains understudied due to the lack of high-resolution structures of L and VP35 complexes from these viruses. Here, we present the cryo-EM structures of the polymerase complexes for the Marburg virus and the Ebola virus at 2.7 Å and 3.1 Å resolutions respectively. Despite the similar assembly and overall structures between these two viruses, we identify virus-specific L-VP35 interactions. Our data show that intergeneric exchange of VP35 would diminish these interactions and prevent the formation of a functional chimeric polymerase complex between L protein and heterologous VP35. Additionally, we identify a contracted conformation of the Ebola virus polymerase structure, revealing the structural dynamics of the polymerase during RNA synthesis. These insights enhance our understanding of filovirus RNA synthesis mechanisms and may facilitate the development of antiviral drugs targeting filovirus polymerase.
PubMed: 40164610
DOI: 10.1038/s41467-025-58308-1
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.7 Å)
Structure validation

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