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8VQE

Homodimeric structure of HER2 S310F extracellular region

Summary for 8VQE
Entry DOI10.2210/pdb8vqe/pdb
Related8VQD
EMDB information43439 43440
DescriptorReceptor tyrosine-protein kinase erbB-2/hIgG1 Fc domain fusion, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose (2 entities in total)
Functional Keywordsreceptor tyrosine kinase, her2, oncogenic mutation, signaling protein
Biological sourceHomo sapiens (human)
More
Total number of polymer chains2
Total formula weight199404.08
Authors
Bang, I.,Koide, S. (deposition date: 2024-01-18, release date: 2024-11-06, Last modification date: 2025-05-14)
Primary citationBang, I.,Hattori, T.,Leloup, N.,Corrado, A.,Nyamaa, A.,Koide, A.,Geles, K.,Buck, E.,Koide, S.
Selective targeting of oncogenic hotspot mutations of the HER2 extracellular domain.
Nat.Chem.Biol., 21:706-715, 2025
Cited by
PubMed Abstract: Oncogenic mutations in the extracellular domain (ECD) of cell-surface receptors could serve as tumor-specific antigens that are accessible to antibody therapeutics. Such mutations have been identified in receptor tyrosine kinases including HER2. However, it is challenging to selectively target a point mutant, while sparing the wild-type protein. Here we developed antibodies selective to HER2 S310F and S310Y, the two most common oncogenic mutations in the HER2 ECD, via combinatorial library screening and structure-guided design. Cryogenic-electron microscopy structures of the HER2 S310F homodimer and an antibody bound to HER2 S310F revealed that these antibodies recognize the mutations in a manner that mimics the dimerization arm of HER2 and thus inhibit HER2 dimerization. These antibodies as T cell engagers selectively killed a HER2 S310F-driven cancer cell line in vitro, and in vivo as a xenograft. These results validate HER2 ECD mutations as actionable therapeutic targets and offer promising candidates toward clinical development.
PubMed: 39438724
DOI: 10.1038/s41589-024-01751-w
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.67 Å)
Structure validation

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