8UHW

The structure of the Clostridium thermocellum AdhE spirosome

Summary for 8UHW

• Entry DOI: 10.2210/pdb8uhw/pdb
• EMDB information: 42284
• Descriptor: Aldehyde-alcohol dehydrogenase, FE (III) ION (2 entities in total)
• Functional Keywords: aldehyde-alcohol dehydrogenase, complex, spirosome, oxidoreductase
• Biological source: Acetivibrio thermocellus DSM 1313
• Total number of polymer chains: 6
• Total formula weight: 587911.30

Authors

Ziegler, S.J.,Gruber, J.N. (deposition date: 2023-10-09, release date: 2024-08-21, Last modification date: 2025-07-09)

Primary citation

Ziegler, S.J.,Knott, B.C.,Gruber, J.N.,Hengge, N.N.,Xu, Q.,Olson, D.G.,Romero, E.E.,Joubert, L.M.,Bomble, Y.J.
Structural characterization and dynamics of AdhE ultrastructures from Clostridium thermocellum show a containment strategy for toxic intermediates.
Elife, 13:-, 2025

PubMed Abstract: , a cellulolytic thermophilic anaerobe, is considered by many to be a prime candidate for the realization of consolidated bioprocessing (CBP) and is known as an industry standard for biofuel production. is among the best biomass degraders identified to date in nature and produces ethanol as one of its main products. Many studies have helped increase ethanol titers in this microbe; however, ethanol production using is still not economically viable. Therefore, a better understanding of its ethanol synthesis pathway is required. The main pathway for ethanol production in involves the bifunctional aldehyde-alcohol dehydrogenase (AdhE). To better understand the function of the AdhE, we used cryo-electron microscopy (cryo-EM) to obtain a 3.28 Å structure of the AdhE complex. This high-resolution structure, in combination with molecular dynamics simulations, provides insight into the substrate channeling of the toxic intermediate acetaldehyde, indicates the potential role of AdhE to regulate activity and cofactor pools, and establishes a basis for future engineering studies. The containment strategy found in this enzyme offers a template that could be replicated in other systems where toxic intermediates need to be sequestered to increase the production of valuable biochemicals.

PubMed: 40577193
DOI: 10.7554/eLife.96966

Experimental method

ELECTRON MICROSCOPY (3.28 Å)