6VLM
Core Catalytic Domain of HIV Integrase in complex with virtual screening hit
Summary for 6VLM
| Entry DOI | 10.2210/pdb6vlm/pdb |
| Descriptor | Integrase, [3-(4-chlorophenyl)[1,3]thiazolo[3,2-a]benzimidazol-2-yl]acetic acid (3 entities in total) |
| Functional Keywords | inhibitor, hydrolase, viral protein, transferase-transferase inhibitor complex, transferase/transferase inhibitor |
| Biological source | Human immunodeficiency virus 1 |
| Total number of polymer chains | 2 |
| Total formula weight | 40058.76 |
| Authors | Klein, D.J.,Sanders, J.M. (deposition date: 2020-01-24, release date: 2020-05-13, Last modification date: 2024-03-06) |
| Primary citation | Yan, X.C.,Sanders, J.M.,Gao, Y.D.,Tudor, M.,Haidle, A.M.,Klein, D.J.,Converso, A.,Lesburg, C.A.,Zang, Y.,Wood, H.B. Augmenting Hit Identification by Virtual Screening Techniques in Small Molecule Drug Discovery. J.Chem.Inf.Model., 60:4144-4152, 2020 Cited by PubMed Abstract: Two orthogonal approaches for hit identification in drug discovery are large-scale and screening. In recent years, due to the emergence of new targets and a rapid increase in the size of the readily synthesizable chemical space, there is a growing emphasis on the integration of the two techniques to improve the hit finding efficiency. Here, we highlight three examples of drug discovery projects at Merck & Co., Inc., Kenilworth, NJ, USA in which different virtual screening (VS) techniques, each specifically tailored to leverage knowledge available for the target, were utilized to augment the selection of high-quality chemical matter for assays and to enhance the diversity and tractability of hits. Central to success is a fully integrated workflow combining and experimental expertise at every stage of the hit identification process. We advocate that workflows encompassing VS as part of an integrated hit finding plan should be widely adopted to accelerate hit identification and foster cross-functional collaborations in modern drug discovery. PubMed: 32309939DOI: 10.1021/acs.jcim.0c00113 PDB entries with the same primary citation |
| Experimental method | X-RAY DIFFRACTION (2.32 Å) |
Structure validation
Download full validation report
