6TVO

Human CRM1-RanGTP in complex with Leptomycin B

Summary for 6TVO

• Entry DOI: 10.2210/pdb6tvo/pdb
• Descriptor: GTP-binding nuclear protein Ran, Exportin-1, GUANOSINE-5'-TRIPHOSPHATE, ... (5 entities in total)
• Functional Keywords: crm1, inhibitor, complex, exportin 1, nuclear protein
• Biological source: Homo sapiens (Human); More
• Total number of polymer chains: 2
• Total formula weight: 143857.01

Authors

Shaikhqasem, A.,Ficner, R. (deposition date: 2020-01-10, release date: 2020-07-08, Last modification date: 2024-11-06)

Primary citation

Shaikhqasem, A.,Dickmanns, A.,Neumann, P.,Ficner, R.
Characterization of Inhibition Reveals Distinctive Properties for Human andSaccharomyces cerevisiaeCRM1.
J.Med.Chem., 63:7545-7558, 2020

PubMed Abstract: The receptor CRM1 is responsible for the nuclear export of many tumor-suppressor proteins and viral ribonucleoproteins. This renders CRM1 an interesting target for therapeutic intervention in diverse cancer types and viral diseases. Structural studies of CRM1 (CRM1) complexes with inhibitors defined the molecular basis for CRM1 inhibition. Nevertheless, no structural information is available for inhibitors bound to human CRM1 (CRM1). Here, we present the structure of the natural inhibitor Leptomycin B bound to the CRM1-RanGTP complex. Despite high sequence conservation and structural similarity in the NES-binding cleft region, CRM1 exhibits 16-fold lower binding affinity than CRM1 toward PKI-NES and significant differences in affinities toward potential CRM1 inhibitors. In contrast to CRM1, competition assays revealed that a human adapted mutant CRM1-T539C does not bind all inhibitors tested. Taken together, our data indicate the importance of using CRM1 for molecular analysis and development of novel antitumor and antiviral drugs.

PubMed: 32585100
DOI: 10.1021/acs.jmedchem.0c00143

Experimental method

X-RAY DIFFRACTION (3.201 Å)