Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)

This is a non-PDB format compatible entry.

Summary for 5JUU

Related5JUO 5JUP 5JUS 5JUT
EMDB information6647 6653 6644 6649 6645 6650 6646 6652 6643 6648
Descriptor18S ribosomal RNA, 25S ribosomal RNA, 5.8S ribosomal RNA, ... (86 entities in total)
Functional Keywords80s-ires, eef2, translocation, sordarin, ribosome
Biological sourceSaccharomyces cerevisiae (Baker's yeast)
Total number of polymer chains83
Total molecular weight3340490.76
Abeyrathne, P.,Koh, C.S.,Grant, T.,Grigorieff, N.,Korostelev, A.A. (deposition date: 2016-05-10, release date: 2016-10-05, Last modification date: 2019-11-27)
Primary citation
Abeyrathne, P.D.,Koh, C.S.,Grant, T.,Grigorieff, N.,Korostelev, A.A.
Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome.
Elife, 5:-, 2016
PubMed: 27159452 (PDB entries with the same primary citation)
DOI: 10.7554/eLife.14874
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone40 7.3% 10.7% 0.48MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
Download full validation reportDownload
PDB entries from 2020-11-25