Crystal Structure of a PHD finger bound to histone H3 T3ph peptide

Summary for 5FB0

DescriptorNuclear autoantigen Sp-100, Peptide from Histone H3, ZINC ION, ... (4 entities in total)
Functional Keywordszinc finger protein, bromodomain, transcription-structural protein complex, transcription/structural protein
Biological sourceHomo sapiens (Human)
Cellular locationNucleus. Isoform Sp100-C: Nucleus  P23497
Chromosome . Nucleus  K7EMV3
Total number of polymer chains4
Total molecular weight47256.72
Li, H.,Zhang, X. (deposition date: 2015-12-13, release date: 2016-05-04, Last modification date: 2016-06-22)
Primary citation
Zhang, X.,Zhao, D.,Xiong, X.,He, Z.,Li, H.
Multifaceted Histone H3 Methylation and Phosphorylation Readout by the Plant Homeodomain Finger of Human Nuclear Antigen Sp100C
J.Biol.Chem., 291:12786-12798, 2016
PubMed: 27129259 (PDB entries with the same primary citation)
DOI: 10.1074/jbc.M116.721159
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.27740.3%2.6%3.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-09-16