3SN8

Crystal structure of SARS coronavirus main protease complexed with Cm-FF-H (soaking)

Summary for 3SN8

Related2H2Z 3SNA 3SNB 3SNC 3SND 3SNE
Related PRD IDPRD_001114
Descriptor3C-like proteinase, N-[(2S)-1-hydroxy-3-phenylpropan-2-yl]-Nalpha-[(2E)-3-phenylprop-2-enoyl]-L-phenylalaninamide (3 entities in total)
Functional Keywords3c-like proteinase, protease, cm-ff-h, active site, hydrolase-hydrolase inhibitor complex, hydrolase/hydrolase inhibitor
Biological sourceSARS coronavirus (SARS-CoV)
Cellular locationNon-structural protein 3: Host membrane; Multi-pass membrane protein (Potential). Non-structural protein 4: Host membrane; Multi-pass membrane protein (Potential). Non-structural protein 6: Host membrane; Multi-pass membrane protein (Potential). Non-structural protein 7: Host cytoplasm, host perinuclear region (By similarity). Non-structural protein 8: Host cytoplasm, host perinuclear region (By similarity). Non-structural protein 9: Host cytoplasm, host perinuclear region (By similarity). Non-structural protein 10: Host cytoplasm, host perinuclear region (By similarity) P0C6U8
Total number of polymer chains1
Total molecular weight34305.16
Authors
Zhu, L.,Hilgenfeld, R. (deposition date: 2011-06-29, release date: 2011-09-07, Last modification date: 2012-12-12)
Primary citation
Zhu, L.,George, S.,Schmidt, M.F.,Al-Gharabli, S.I.,Rademann, J.,Hilgenfeld, R.
Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease.
Antiviral Res., 92:204-212, 2011
PubMed: 21854807 (PDB entries with the same primary citation)
DOI: 10.1016/j.antiviral.2011.08.001
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.99 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.27080.3%3.0%2.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3sn8
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Molmil generated image of 3sn8
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Molmil generated image of 3sn8
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More Biological unit images

Molmil generated image of 3sn8
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Molmil generated image of 3sn8
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Molmil generated image of 3sn8
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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3sn8.pdb1.gz [105.83 KB])