3OGO

Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212

Replaces:  3MIQ

Summary for 3OGO

DescriptorGreen fluorescent protein, GFP-nanobody, ISOPROPYL ALCOHOL, ... (4 entities in total)
Functional Keywordsgfp, gfp-nanobody, beta-barrel, antibody, luminescent protein-immune system complex, fluorescent protein-immune system complex, fluorescent protein/immune system
Biological sourceAequorea victoria (Jellyfish)
More
Total number of polymer chains8
Total molecular weight167800.02
Authors
Kubala, M.H.,Kovtun, O.,Alexandrov, K.,Collins, B.M. (deposition date: 2010-08-17, release date: 2010-08-25, Last modification date: 2011-07-13)
Primary citation
Kubala, M.H.,Kovtun, O.,Alexandrov, K.,Collins, B.M.
Structural and thermodynamic analysis of the GFP:GFP-nanobody complex.
Protein Sci., 19:2389-2401, 2010
PubMed: 20945358 (PDB entries with the same primary citation)
DOI: 10.1002/pro.519
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.8 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.250120.1%7.1%1.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3ogo
no rotation
Molmil generated image of 3ogo
rotated about x axis by 90°
Molmil generated image of 3ogo
rotated about y axis by 90°
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan