3G3B

Structure of a lamprey variable lymphocyte receptor mutant in complex with a protein antigen

Summary for 3G3B

Related3G39 3G3A
Descriptorvariable lymphocyte receptor VLRB.2D, Lysozyme C (3 entities in total)
Functional Keywordsvlr, antibody, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, hydrolase-immune system complex, hydrolase/immune system
Biological sourcePetromyzon marinus (Sea Lamprey)
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Cellular locationSecreted P00698
Total number of polymer chains8
Total molecular weight132205.6
Authors
Deng, L.,Velikovsky, C.A.,Mariuzza, R.A. (deposition date: 2009-02-02, release date: 2009-06-23, Last modification date: 2011-07-13)
Primary citation
Velikovsky, C.A.,Deng, L.,Tasumi, S.,Iyer, L.M.,Kerzic, M.C.,Aravind, L.,Pancer, Z.,Mariuzza, R.A.
Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen.
Nat.Struct.Mol.Biol., 16:725-730, 2009
PubMed: 19543291 (PDB entries with the same primary citation)
DOI: 10.1038/nsmb.1619
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.4 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.24790.4%6.3%4.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload