2VUZ

Crystal structure of Codakine in complex with biantennary nonasaccharide at 1.7A resolution

Summary for 2VUZ

• Entry DOI: 10.2210/pdb2vuz/pdb
• Related: 2VUV
• Descriptor: CODAKINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... (5 entities in total)
• Functional Keywords: nonasaccharide, codakia orbicularis, sugar-binding protein, c-type, lectin, codakine, biantennary, invertebrate, sugar binding protein
• Biological source: CODAKIA ORBICULARIS
• Total number of polymer chains: 1
• Total formula weight: 15821.04

Authors

Gourdine, J.P.,Cioci, G.C.,Miguet, L.,Unverzagt, C.,Varrot, A.,Gauthier, C.,Smith-Ravin, E.J.,Imberty, A. (deposition date: 2008-06-02, release date: 2008-08-05, Last modification date: 2023-12-13)

• Primary citation: Gourdine, J.P.,Cioci, G.C.,Miguet, L.,Unverzagt, C.,Silva, D.V.,Varrot, A.,Gautier, C.,Smith-Ravin, E.J.,Imberty, A.; High Affinity Interaction between a Bivalve C-Type Lectin and a Biantennary Complex-Type N-Glycan Revealed by Crystallography and Microcalorimetry.; J.Biol.Chem., 283:30112-, 2008; PubMed: 18687680; DOI: 10.1074/JBC.M804353200

Experimental method

X-RAY DIFFRACTION (1.7 Å)