2LMS
A single GalNAc residue on Threonine-106 modifies the dynamics and the structure of Interferon alpha-2a around the glycosylation site
Summary for 2LMS
Entry DOI | 10.2210/pdb2lms/pdb |
NMR Information | BMRB: 18135 |
Descriptor | Interferon alpha-2, 2-acetamido-2-deoxy-alpha-D-galactopyranose (2 entities in total) |
Functional Keywords | cytokine, glycoprotein, o-glycosylation, signaling protein, type i interferons, immune system |
Biological source | Homo sapiens (human) |
Total number of polymer chains | 1 |
Total formula weight | 19616.50 |
Authors | Ghasriani, H.,Belcourt, P.J.F.,Sauve, S.,Hodgson, D.J.,Gingras, G.,Brochu, D.,Gilbert, M.,Aubin, Y. (deposition date: 2011-12-12, release date: 2012-12-05, Last modification date: 2024-11-27) |
Primary citation | Ghasriani, H.,Belcourt, P.J.,Sauve, S.,Hodgson, D.J.,Brochu, D.,Gilbert, M.,Aubin, Y. A single N-acetylgalactosamine residue at threonine 106 modifies the dynamics and structure of interferon alpha2a around the glycosylation site. J.Biol.Chem., 288:247-254, 2013 Cited by PubMed Abstract: Enzymatic addition of GalNAc to isotopically labeled IFNα2a produced in Escherichia coli yielded the O-linked glycoprotein GalNAcα-[(13)C,(15)N]IFNα2a. The three-dimensional structure of GalNAcα-IFNα2a has been determined in solution by NMR spectroscopy at high resolution. Proton-nitrogen heteronuclear Overhauser enhancement measurements revealed that the addition of a single monosaccharide unit at Thr-106 significantly slowed motions of the glycosylation loop on the nanosecond time scale. Subsequent addition of a Gal unit produced Gal(β1,3)GalNAcα-[(13)C,(15)N]IFNα2a. This extension resulted in a further decrease in the dynamics of this loop. The methodology used here allowed the first such description of the structure and dynamics of an O-glycoprotein and opens the way to the study of this class of proteins. PubMed: 23184955DOI: 10.1074/jbc.M112.413252 PDB entries with the same primary citation |
Experimental method | SOLUTION NMR |
Structure validation
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