2CDF

Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide-specific T cell receptors (TCR 5E)

Summary for 2CDF

Related1B88 1BWM 1H5B 1HXM 1KTK 1L0Y 1NFD 1TVD 2AXH 2AXJ 2CDE 2CDG 1AO7 1QRN 1QSE 1QSF 1BD2 1LP9 1MI5 2BNQ 2BNR 2BNU 1KGC 1FO0 1KJ2 1NAM 2CKB 1G6R 1MWA 1KB5 1TCR 1FYT 1J8H 1D9K 1YMM 1YPZ 1ZT4 1Z5L 1ZHN 2AKR 1CD1
DescriptorTCR 5E (3 entities in total)
Functional Keywordscell receptor, cd1d, alpha-galactosylceramide, non-canonical tcr, tcr, t cell receptor, mhc class i, natural killer t cell, tcr 5e
Biological sourceHOMO SAPIENS (HUMAN)
Total number of polymer chains2
Total molecular weight48832.09
Authors
Gadola, S.D.,Koch, M.,Marles-Wright, J.,Lissin, N.M.,Sheperd, D.,Matulis, G.,Harlos, K.,Villiger, P.M.,Stuart, D.I.,Jakobsen, B.K.,Cerundolo, V.,Jones, E.Y. (deposition date: 2006-01-23, release date: 2006-03-07, Last modification date: 2011-07-13)
Primary citation
Gadola, S.D.,Koch, M.,Marles-Wright, J.,Lissin, N.M.,Sheperd, D.,Matulis, G.,Harlos, K.,Villiger, P.M.,Stuart, D.I.,Jakobsen, B.K.,Cerundolo, V.,Jones, E.Y.
Structrue and Binding Kinetics of Three Different Human Cd1D-Alpha-Galactosylceramide-Specific T Cell Receptors
J.Exp.Med., 203:699-, 2006
PubMed: 16520393 (PDB entries with the same primary citation)
DOI: 10.1084/JEM.20052369
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.25 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.28580.7%8.6%8.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2cdf
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Molmil generated image of 2cdf
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Molmil generated image of 2cdf
rotated about y axis by 90°