9TZ5
Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (Z) | Coxiellacae Large Subunit Peptide (CLaSP) | polymer | 21 | 2530.1 | 1 | Coxiella burnetii | ||
| 2 | B (0) | Large ribosomal subunit protein bL33 | polymer | 70 | 8054.5 | 1 | UniProt (Q83EM5) Pfam (PF00471) | Coxiella burnetii | 50S ribosomal protein L33 |
| 3 | C (1) | Large ribosomal subunit protein uL24 | polymer | 107 | 11814.9 | 1 | UniProt (Q83ER5) Pfam (PF00467) Pfam (PF17136) | Coxiella burnetii | 50S ribosomal protein L24 |
| 4 | D (2) | Large ribosomal subunit protein uL18 | polymer | 117 | 13137.4 | 1 | UniProt (Q83ER0) Pfam (PF00861) | Coxiella burnetii | 50S ribosomal protein L18 |
| 5 | E (3) | Large ribosomal subunit protein bL36 | polymer | 40 | 4668.7 | 1 | UniProt (Q4AAY2) Pfam (PF00444) | Coxiella burnetii | 50S ribosomal protein L36 |
| 6 | F (b) | 5S ribosomal RNA | polymer | 117 | 37630.4 | 1 | GenBank (2294758066) | Coxiella burnetii | |
| 7 | G (c) | Large ribosomal subunit protein bL19 | polymer | 115 | 13302.4 | 1 | UniProt (Q83E85) Pfam (PF01245) | Coxiella burnetii | 50S ribosomal protein L19 |
| 8 | H (d) | Large ribosomal subunit protein uL3 | polymer | 217 | 23547.1 | 1 | UniProt (B6J263) | Coxiella burnetii | 50S ribosomal protein L3 |
| 9 | I (e) | Large ribosomal subunit protein bL20 | polymer | 119 | 13476.0 | 1 | UniProt (Q83C13) Pfam (PF00453) | Coxiella burnetii | 50S ribosomal protein L20 |
| 10 | J (f) | Large ribosomal subunit protein uL5 | polymer | 182 | 20782.4 | 1 | UniProt (Q83ER4) Pfam (PF00673) Pfam (PF00281) | Coxiella burnetii | 50S ribosomal protein L5 |
| 11 | K (g) | Large ribosomal subunit protein uL6 | polymer | 178 | 19228.5 | 1 | UniProt (B6J5E7) | Coxiella burnetii | 50S ribosomal protein L6 |
| 12 | L (h) | Large ribosomal subunit protein bL21 | polymer | 115 | 12785.9 | 1 | UniProt (Q83EE0) Pfam (PF00829) | Coxiella burnetii | 50S ribosomal protein L21 |
| 13 | M (i) | Large ribosomal subunit protein uL13 | polymer | 142 | 15840.5 | 1 | UniProt (B6J4G5) | Coxiella burnetii | 50S ribosomal protein L13 |
| 14 | N (j) | Large ribosomal subunit protein uL22 | polymer | 115 | 12605.5 | 1 | UniProt (B6J258) | Coxiella burnetii | 50S ribosomal protein L22 |
| 15 | O (k) | Large ribosomal subunit protein uL15 | polymer | 143 | 15320.0 | 1 | UniProt (B6J244) | Coxiella burnetii | 50S ribosomal protein L15 |
| 16 | P (m) | Large ribosomal subunit protein bL17 | polymer | 126 | 14574.9 | 1 | UniProt (B6J237) | Coxiella burnetii | 50S ribosomal protein L17 |
| 17 | Q (o) | Large ribosomal subunit protein uL2 | polymer | 275 | 30481.4 | 1 | UniProt (B6J260) | Coxiella burnetii | 50S ribosomal protein L2 |
| 18 | R (q) | Large ribosomal subunit protein bL9 | polymer | 152 | 16604.0 | 1 | UniProt (A9ND50) | Coxiella burnetii | 50S ribosomal protein L9 |
| 19 | S (r) | Large ribosomal subunit protein uL29 | polymer | 65 | 7717.0 | 1 | UniProt (B6J5E0) | Coxiella burnetii | 50S ribosomal protein L29 |
| 20 | T (s) | Large ribosomal subunit protein uL16 | polymer | 137 | 15532.4 | 1 | UniProt (B6J256) | Coxiella burnetii | 50S ribosomal protein L16 |
| 21 | U (t) | Large ribosomal subunit protein uL30 | polymer | 63 | 7312.6 | 1 | UniProt (B6J5F0) | Coxiella burnetii | 50S ribosomal protein L30 |
| 22 | V (u) | Large ribosomal subunit protein bL25 | polymer | 244 | 26577.0 | 1 | UniProt (B6J9D8) | Coxiella burnetii | 50S ribosomal protein L25,General stress protein CTC |
| 23 | W (v) | Large ribosomal subunit protein bL32 | polymer | 64 | 7486.5 | 1 | UniProt (B6J8E7) | Coxiella burnetii | 50S ribosomal protein L32 |
| 24 | X (w) | Large ribosomal subunit protein uL4 | polymer | 205 | 22409.7 | 1 | UniProt (A9NAM5) | Coxiella burnetii | 50S ribosomal protein L4 |
| 25 | Y (x) | Large ribosomal subunit protein uL14 | polymer | 122 | 13564.1 | 1 | UniProt (B6J5E2) | Coxiella burnetii | 50S ribosomal protein L14 |
| 26 | Z (y) | Large ribosomal subunit protein bL34 | polymer | 44 | 5357.4 | 1 | UniProt (B6J2B1) | Coxiella burnetii | 50S ribosomal protein L34 |
| 27 | AA (z) | Large ribosomal subunit protein bL35 | polymer | 64 | 7415.9 | 1 | UniProt (B6J7Y0) | Coxiella burnetii | 50S ribosomal protein L35 |
| 28 | BA (a) | 23S ribosomal RNA | polymer | 2925 | 947544.9 | 1 | Coxiella burnetii | ||
| 29 | CA (8) | Large ribosomal subunit protein bL27 | polymer | 90 | 10069.7 | 1 | UniProt (B6J9K3) | Coxiella burnetii | 50S ribosomal protein L27 |
| 30 | DA (7) | Large ribosomal subunit protein uL23 | polymer | 95 | 10828.6 | 1 | UniProt (Q83ES2) Pfam (PF00276) | Coxiella burnetii | 50S ribosomal protein L23 |
| 31 | EA (9) | Large ribosomal subunit protein bL28 | polymer | 79 | 9267.0 | 1 | UniProt (B6J5S6) | Coxiella burnetii | 50S ribosomal protein L28 |
| 32 | FA (3) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) PubChem (32051) | |||
| 33 | AB, AC, AD, AE, AF... (a, b, d, o) | MAGNESIUM ION | non-polymer | 24.3 | 167 | Chemie (MG) PubChem (888) | |||
| 34 | AI, AJ, AK, AL, BH... (a, b, d, o, s...) | POTASSIUM ION | non-polymer | 39.1 | 134 | Chemie (K) PubChem (813) | |||
| 35 | QA, RA, SA (a) | (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE | non-polymer | 444.4 | 3 | Chemie (DXT) | |||
| 36 | YL, ZL (a, 9) | water | water | 18.0 | 9 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 31 |
| Total formula weight | 1377467.2 | |
| Non-Polymers* | Number of molecules | 305 |
| Total formula weight | 10696.8 | |
| All* | Total formula weight | 1388164.0 |
