Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

9TZ5

Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0005737	cellular_component	cytoplasm
1	0003735	molecular_function	structural constituent of ribosome
1	0006412	biological_process	translation
1	0019843	molecular_function	rRNA binding
1	0022625	cellular_component	cytosolic large ribosomal subunit
2	0005737	cellular_component	cytoplasm
2	0006412	biological_process	translation
2	0008097	molecular_function	5S rRNA binding
2	0019843	molecular_function	rRNA binding
2	0022625	cellular_component	cytosolic large ribosomal subunit
3	0005737	cellular_component	cytoplasm
3	0006412	biological_process	translation
3	0008270	molecular_function	zinc ion binding
3	0019843	molecular_function	rRNA binding
3	0022625	cellular_component	cytosolic large ribosomal subunit
7	0003735	molecular_function	structural constituent of ribosome
7	0006412	biological_process	translation
7	0019843	molecular_function	rRNA binding
7	0022625	cellular_component	cytosolic large ribosomal subunit
8	0003735	molecular_function	structural constituent of ribosome
8	0006412	biological_process	translation
8	0022625	cellular_component	cytosolic large ribosomal subunit
8	0043022	molecular_function	ribosome binding
8	1902626	biological_process	assembly of large subunit precursor of preribosome
9	0003735	molecular_function	structural constituent of ribosome
9	0006412	biological_process	translation
9	0019843	molecular_function	rRNA binding
9	0022625	cellular_component	cytosolic large ribosomal subunit
c	0003735	molecular_function	structural constituent of ribosome
c	0006412	biological_process	translation
c	0022625	cellular_component	cytosolic large ribosomal subunit
d	0003735	molecular_function	structural constituent of ribosome
d	0006412	biological_process	translation
d	0019843	molecular_function	rRNA binding
d	0022625	cellular_component	cytosolic large ribosomal subunit
e	0000027	biological_process	ribosomal large subunit assembly
e	0003735	molecular_function	structural constituent of ribosome
e	0019843	molecular_function	rRNA binding
e	0022625	cellular_component	cytosolic large ribosomal subunit
f	0000049	molecular_function	tRNA binding
f	0003723	molecular_function	RNA binding
f	0003735	molecular_function	structural constituent of ribosome
f	0006412	biological_process	translation
f	0019843	molecular_function	rRNA binding
f	0022625	cellular_component	cytosolic large ribosomal subunit
g	0002181	biological_process	cytoplasmic translation
g	0003723	molecular_function	RNA binding
g	0003735	molecular_function	structural constituent of ribosome
g	0006412	biological_process	translation
g	0019843	molecular_function	rRNA binding
g	0022625	cellular_component	cytosolic large ribosomal subunit
h	0003735	molecular_function	structural constituent of ribosome
h	0005737	cellular_component	cytoplasm
h	0006412	biological_process	translation
h	0019843	molecular_function	rRNA binding
h	0022625	cellular_component	cytosolic large ribosomal subunit
i	0003729	molecular_function	mRNA binding
i	0003735	molecular_function	structural constituent of ribosome
i	0005840	cellular_component	ribosome
i	0006412	biological_process	translation
i	0017148	biological_process	negative regulation of translation
i	0022625	cellular_component	cytosolic large ribosomal subunit
j	0003735	molecular_function	structural constituent of ribosome
j	0006412	biological_process	translation
j	0015934	cellular_component	large ribosomal subunit
j	0019843	molecular_function	rRNA binding
j	0022625	cellular_component	cytosolic large ribosomal subunit
k	0003735	molecular_function	structural constituent of ribosome
k	0006412	biological_process	translation
k	0019843	molecular_function	rRNA binding
k	0022625	cellular_component	cytosolic large ribosomal subunit
m	0003735	molecular_function	structural constituent of ribosome
m	0006412	biological_process	translation
m	0015934	cellular_component	large ribosomal subunit
m	0022625	cellular_component	cytosolic large ribosomal subunit
o	0002181	biological_process	cytoplasmic translation
o	0003723	molecular_function	RNA binding
o	0003735	molecular_function	structural constituent of ribosome
o	0006412	biological_process	translation
o	0015934	cellular_component	large ribosomal subunit
o	0019843	molecular_function	rRNA binding
q	0006412	biological_process	translation
q	0019843	molecular_function	rRNA binding
r	0006412	biological_process	translation
r	0022625	cellular_component	cytosolic large ribosomal subunit
s	0003735	molecular_function	structural constituent of ribosome
s	0006412	biological_process	translation
s	0019843	molecular_function	rRNA binding
s	0022625	cellular_component	cytosolic large ribosomal subunit
t	0006412	biological_process	translation
t	0022625	cellular_component	cytosolic large ribosomal subunit
u	0003723	molecular_function	RNA binding
u	0006412	biological_process	translation
u	0008097	molecular_function	5S rRNA binding
u	0022625	cellular_component	cytosolic large ribosomal subunit
v	0006412	biological_process	translation
w	0003735	molecular_function	structural constituent of ribosome
w	0006412	biological_process	translation
w	0019843	molecular_function	rRNA binding
x	0003735	molecular_function	structural constituent of ribosome
x	0006412	biological_process	translation
x	0019843	molecular_function	rRNA binding
x	0022625	cellular_component	cytosolic large ribosomal subunit
x	0070180	molecular_function	large ribosomal subunit rRNA binding
y	0006412	biological_process	translation
z	0003735	molecular_function	structural constituent of ribosome
z	0006412	biological_process	translation
z	0015934	cellular_component	large ribosomal subunit
z	0022625	cellular_component	cytosolic large ribosomal subunit

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtrkgvrrn.DGslirFdnNavVL

Chain	Residue	Details
x	ALA60-LEU86

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. MikISGQkpLiTyARkS

Chain	Residue	Details
f	MET57-SER73

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrfHaRArGRanqilkrtCHITVkV

Chain	Residue	Details
j	ARG83-VAL107

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGVAmNPvD

Chain	Residue	Details
o	PRO218-ASP229

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FkegqvvDvrGlTrGKGfaGtvkR

Chain	Residue	Details
d	PHE104-ARG127

site_id	PS00525
Number of Residues	9
Details	RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI

Chain	Residue	Details
g	PRO155-ILE163

site_id	PS00651
Number of Residues	28
Details	RIBOSOMAL_L9 Ribosomal protein L9 signature. GniGdqvvVkpGYarNFLlplgkAvpaT

Chain	Residue	Details
q	GLY13-THR40

site_id	PS00783
Number of Residues	23
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. IKGMLPkgpl.GRqlyrkLkIYaG

Chain	Residue	Details
i	ILE105-GLY127

site_id	PS00784
Number of Residues	20
Details	RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTYQpskqkRnrth.GFraR

Chain	Residue	Details
y	LYS2-ARG21

site_id	PS00828
Number of Residues	26
Details	RIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkvIrRngvVrViCsda.RHkQrQ

Chain	Residue	Details
3	CYS11-GLN36

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GnIIvRQRGthyrpG

Chain	Residue	Details
8	GLY34-GLY48

site_id	PS00936
Number of Residues	27
Details	RIBOSOMAL_L35 Ribosomal protein L35 signature. KTNrGAvKRFkvtgsgkikraasnh.NH

Chain	Residue	Details
z	LYS5-HIS31

site_id	PS00937
Number of Residues	17
Details	RIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRaLWIVRINaaaR

Chain	Residue	Details
e	LYS54-ARG70

site_id	PS01015
Number of Residues	16
Details	RIBOSOMAL_L19 Ribosomal protein L19 signature. VnRrGDVR.RAKLYYLR

Chain	Residue	Details
c	VAL87-ARG102

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDtViVItGrdKGrq.GkV

Chain	Residue	Details
1	ASP9-VAL26

site_id	PS01167
Number of Residues	23
Details	RIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK

Chain	Residue	Details
m	ILE34-LYS56

site_id	PS01169
Number of Residues	23
Details	RIBOSOMAL_L21 Ribosomal protein L21 signature. IeiiKfkrRKhhmkrqGHRQdfT

Chain	Residue	Details
h	ILE72-THR94

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI2
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00251","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	215
Details	Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	1
Details	Modified residue: {"description":"N5-methylglutamine","evidences":[{"source":"HAMAP-Rule","id":"MF_01325","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	69
Details	Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	9
Details	Compositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)