9RWZ
ZSWIM8-CUL3 complex bound to AGO2-miR-7-CYRANO
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Protein argonaute-2 | polymer | 870 | 98554.4 | 1 | UniProt (Q9UKV8) | Homo sapiens (human) | Argonaute2,hAgo2,Argonaute RISC catalytic component 2,Eukaryotic translation initiation factor 2C 2,eIF-2C 2,eIF2C 2,PAZ Piwi domain protein,PPD,Protein slicer |
| 2 | B, C (B, C) | Elongin-B | polymer | 118 | 13147.8 | 2 | UniProt (Q15370) | Homo sapiens (human) | EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2 |
| 3 | D, E (D, E) | Elongin-C | polymer | 112 | 12485.1 | 2 | UniProt (Q15369) | Homo sapiens (human) | EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1 |
| 4 | F (G) | miR-7 | polymer | 24 | 7690.5 | 1 | Homo sapiens | ||
| 5 | G, H (H, I) | Cullin-3 | polymer | 396 | 46410.1 | 2 | UniProt (Q13618) | Homo sapiens (human) | CUL-3 |
| 6 | I (T) | CYRANO trigger RNA | polymer | 120 | 38577.8 | 1 | GenBank (2994212338) | Homo sapiens | |
| 7 | J, K (N, M) | Zinc finger SWIM domain-containing protein 8 | polymer | 1866 | 200458.0 | 2 | UniProt (A7E2V4) | Homo sapiens (human) | |
| 8 | L, M (N, M) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
A: 2 - 859 (UniProt: Q9UKV8)
H, I: 1 - 390 (UniProt: Q13618)
T: 2 - 116 (GenBank: 2994212338)
N, M: 1 - 1837 (UniProt: A7E2V4)
| PDB | External Database | Details |
|---|---|---|
| Met -10 | - | initiating methionine |
| Gly -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Ser -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Arg 342 | Ile 342 | engineered mutation |
| Asp 346 | Leu 346 | engineered mutation |
| Glu 391 | - | expression tag |
| Asn 392 | - | expression tag |
| Leu 393 | - | expression tag |
| Tyr 394 | - | expression tag |
| Phe 395 | - | expression tag |
| Gln 396 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| G 1 | - | expression tag |
| A 117 | - | expression tag |
| A 118 | - | expression tag |
| A 119 | - | expression tag |
| A 120 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 1838 | - | expression tag |
| Trp 1839 | - | expression tag |
| Ser 1840 | - | expression tag |
| His 1841 | - | expression tag |
| Pro 1842 | - | expression tag |
| Gln 1843 | - | expression tag |
| Phe 1844 | - | expression tag |
| Glu 1845 | - | expression tag |
| Lys 1846 | - | expression tag |
| Gly 1847 | - | expression tag |
| Gly 1848 | - | expression tag |
| Gly 1849 | - | expression tag |
| Ser 1850 | - | expression tag |
| Gly 1851 | - | expression tag |
| Gly 1852 | - | expression tag |
| Gly 1853 | - | expression tag |
| Ser 1854 | - | expression tag |
| Gly 1855 | - | expression tag |
| Gly 1856 | - | expression tag |
| Ser 1857 | - | expression tag |
| Ala 1858 | - | expression tag |
| Trp 1859 | - | expression tag |
| Ser 1860 | - | expression tag |
| His 1861 | - | expression tag |
| Pro 1862 | - | expression tag |
| Gln 1863 | - | expression tag |
| Phe 1864 | - | expression tag |
| Glu 1865 | - | expression tag |
| Lys 1866 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 11 |
| Total formula weight | 689824.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 130.8 | |
| All* | Total formula weight | 689955.6 |






