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9RWZ

ZSWIM8-CUL3 complex bound to AGO2-miR-7-CYRANO

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Protein argonaute-2polymer87098554.41UniProt (Q9UKV8)Homo sapiens (human)Argonaute2,hAgo2,Argonaute RISC catalytic component 2,Eukaryotic translation initiation factor 2C 2,eIF-2C 2,eIF2C 2,PAZ Piwi domain protein,PPD,Protein slicer
2B, C
(B, C)
Elongin-Bpolymer11813147.82UniProt (Q15370)Homo sapiens (human)EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2
3D, E
(D, E)
Elongin-Cpolymer11212485.12UniProt (Q15369)Homo sapiens (human)EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1
4F
(G)
miR-7polymer247690.51Homo sapiens
5G, H
(H, I)
Cullin-3polymer39646410.12UniProt (Q13618)Homo sapiens (human)CUL-3
6I
(T)
CYRANO trigger RNApolymer12038577.81GenBank (2994212338)Homo sapiens
7J, K
(N, M)
Zinc finger SWIM domain-containing protein 8polymer1866200458.02UniProt (A7E2V4)Homo sapiens (human)
8L, M
(N, M)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A: 2 - 859 (UniProt: Q9UKV8)
PDBExternal DatabaseDetails
Met -10-initiating methionine
Gly -9-expression tag
Ser -8-expression tag
Ser -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
Gly 0-expression tag
Ser 1-expression tag
H, I: 1 - 390 (UniProt: Q13618)
PDBExternal DatabaseDetails
Arg 342Ile 342engineered mutation
Asp 346Leu 346engineered mutation
Glu 391-expression tag
Asn 392-expression tag
Leu 393-expression tag
Tyr 394-expression tag
Phe 395-expression tag
Gln 396-expression tag
T: 2 - 116 (GenBank: 2994212338)
PDBExternal DatabaseDetails
G 1-expression tag
A 117-expression tag
A 118-expression tag
A 119-expression tag
A 120-expression tag
N, M: 1 - 1837 (UniProt: A7E2V4)
PDBExternal DatabaseDetails
Gly 1838-expression tag
Trp 1839-expression tag
Ser 1840-expression tag
His 1841-expression tag
Pro 1842-expression tag
Gln 1843-expression tag
Phe 1844-expression tag
Glu 1845-expression tag
Lys 1846-expression tag
Gly 1847-expression tag
Gly 1848-expression tag
Gly 1849-expression tag
Ser 1850-expression tag
Gly 1851-expression tag
Gly 1852-expression tag
Gly 1853-expression tag
Ser 1854-expression tag
Gly 1855-expression tag
Gly 1856-expression tag
Ser 1857-expression tag
Ala 1858-expression tag
Trp 1859-expression tag
Ser 1860-expression tag
His 1861-expression tag
Pro 1862-expression tag
Gln 1863-expression tag
Phe 1864-expression tag
Glu 1865-expression tag
Lys 1866-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight689824.8
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight689955.6
*Water molecules are not included.

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PDB entries from 2026-03-18

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