9R6S
Prefusion stabilized spike glycoprotein of human coronavirus OC43.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Spike glycoprotein | polymer | 1297 | 144009.2 | 3 | UniProt (A0A3S6FHI0) | Human coronavirus OC43 | S glycoprotein,E2,Peplomer protein |
| 2 | D, E, F, G, H... (D, E, F, G, H...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 18 | In PDB GlyTouCan (G42666HT) | |||
| 3 | AA, AB, BA, BB, CA... (A, C, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 33 | Chemie (NAG) | |||
| 4 | GA, SA, TA (A, B, C) | Sapienic acid | non-polymer | 254.4 | 3 | Chemie (8Z9) |
Sequence modifications
A, B, C: 1 - 1297 (UniProt: A0A3S6FHI0)
| PDB | External Database | Details |
|---|---|---|
| His 246 | Tyr 246 | conflict |
| Gly 413 | Arg 413 | conflict |
| Arg 423 | Leu 423 | conflict |
| Arg 428 | Ser 428 | conflict |
| Tyr 653 | Leu 653 | conflict |
| Ser 759 | Arg 759 | conflict |
| Ala 761 | Ser 761 | conflict |
| Gly 762 | Arg 762 | conflict |
| Gly 763 | Arg 763 | conflict |
| Val 772 | Thr 772 | conflict |
| Gly 838 | Glu 838 | conflict |
| Glu 847 | Asn 847 | conflict |
| Ile 945 | Val 945 | conflict |
| Gln 974 | Ser 974 | conflict |
| Asn 982 | Ala 982 | conflict |
| Pro 1029 | Ala 1029 | conflict |
| Pro 1075 | Ala 1075 | conflict |
| Pro 1076 | Leu 1076 | conflict |
| Lys 1084 | Arg 1084 | conflict |
| Arg 1100 | Gln 1100 | conflict |
| Leu 1231 | Ser 1231 | conflict |
| Ser 1236 | Pro 1236 | conflict |
| Gln 1284 | His 1284 | conflict |
| Lys 1292 | Ile 1292 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 432027.6 | |
| Branched | Number of molecules | 18 |
| Total formula weight | 7639.2 | |
| Non-Polymers* | Number of molecules | 36 |
| Total formula weight | 8063.1 | |
| All* | Total formula weight | 447729.9 |






