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9MJ4

Yeast V-ATPase Vo proton channel bound to nanobody 2WVA149

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(D)
V-type proton ATPase subunit c'polymer16417046.41UniProt (P32842)
Pfam (PF00137)
Saccharomyces cerevisiae (brewer's yeast)V-ATPase subunit c',Proteolipid protein VMA11,Trifluoperazine resistance protein 3,V-ATPase 16 kDa proteolipid subunit 2,Vacuolar proton pump c' subunit
2B
(C)
V-type proton ATPase subunit c''polymer21322610.61UniProt (P23968)
Pfam (PF00137)
Saccharomyces cerevisiae (brewer's yeast)V-ATPase subunit c'',V-ATPase 22 kDa proteolipid subunit,Vacuolar proton pump c'' subunit
3C
(N)
V0 assembly protein 1polymer26529694.91UniProt (P53262)
Pfam (PF20520)
Saccharomyces cerevisiae (brewer's yeast)
4D
(M)
V-type proton ATPase subunit epolymer738387.11UniProt (Q3E7B6)
Pfam (PF05493)
Saccharomyces cerevisiae (brewer's yeast)V-ATPase subunit e,Low dye-binding protein 10,Vacuolar proton pump subunit e
5E, G, H, I, J...
(E, F, G, H, I...)
V-type proton ATPase subunit cpolymer16016357.58UniProt (P25515)
Pfam (PF00137)
Saccharomyces cerevisiae (brewer's yeast)V-ATPase subunit c,Guanine nucleotide exchange factor 2,V-ATPase 16 kDa proteolipid subunit 1,Vacuolar proton pump c subunit
6F
(O)
Yeast V-ATPase subunit fpolymer859369.91UniProt (P0C5R9)Saccharomyces cerevisiae (brewer's yeast)
7N
(B)
V-type proton ATPase subunit dpolymer34539822.51UniProt (P32366)
Pfam (PF01992)
Saccharomyces cerevisiae (brewer's yeast)V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d
8O
(A)
V-type proton ATPase subunit a, vacuolar isoformpolymer84095625.51UniProt (P32563)
Pfam (PF01496)
Saccharomyces cerevisiae (brewer's yeast)V-ATPase a 1 subunit,V-ATPase 95 kDa subunit,Vacuolar pH protein 1,Vacuolar proton pump a subunit,Vacuolar proton translocating ATPase subunit a 1
9P
(Q)
Nanobody 2WVA149polymer14215485.11Lama glama
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight368901.9
All*Total formula weight368901.9
*Water molecules are not included.

237735

PDB entries from 2025-06-18

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