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9BAQ

CryoEM structure of DIM2-HP1-H3K9me3-DNA complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (cytosine-5-)-methyltransferasepolymer1244139935.91UniProt (Q96W73)
Pfam (PF00145)
Neurospora crassa
2B, C
(B, C)
Heterochromatin protein onepolymer26830489.12UniProt (Q870N8)
Pfam (PF00385)
Pfam (PF01393)
Neurospora crassa
3D, E
(D, F)
Histone H3.2polymer252791.32UniProt (Q5MYA4)
UniProt (by SIFTS) (P07041)
Neurospora crassa
4F
(G)
DNA (5'-D(*AP*GP*TP*AP*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*TP*AP*GP*T)-3')polymer185709.71Neurospora crassa
5G
(H)
DNA (5'-D(*AP*CP*TP*AP*CP*T)-R(P*(PYO))-D(P*CP*TP*CP*CP*TP*CP*CP*TP*AP*CP*T)-3')polymer185323.41Neurospora crassa
6H
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
7I
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
A: 1 - 1242 (UniProt: Q96W73)
PDBExternal DatabaseDetails
Gly -1-expression tag
Ser 0-expression tag
B, C: 1 - 266 (UniProt: Q870N8)
PDBExternal DatabaseDetails
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains7
Total formula weight217529.8
Non-Polymers*Number of molecules2
Total formula weight449.8
All*Total formula weight217979.6
*Water molecules are not included.

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PDB entries from 2025-06-25

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