8ZCA
Crystal structure of human CD47 ECD bound to Fab of Hu1C8
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (A, B) | 1C8 Fab light chain | polymer | 218 | 23801.3 | 2 | Homo sapiens (human) | ||
2 | B, D (D, C) | 1C8 Fab heavy chain | polymer | 225 | 23760.6 | 2 | Homo sapiens (human) | ||
3 | E, F (E, F) | Leukocyte surface antigen CD47 | polymer | 131 | 14924.7 | 2 | UniProt (Q08722) Pfam (PF08204) | Homo sapiens (human) | Antigenic surface determinant protein OA3,Integrin-associated protein,IAP,Protein MER6 |
4 | G, I (A, B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
5 | H, J (D, C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
6 | K, L, M, N (E, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
7 | O, P, Q, R, S... (A, D, B, C, E...) | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence modifications
E, F: 1 - 121 (UniProt: Q08722)
PDB | External Database | Details |
---|---|---|
Gly 15 | Cys 33 | conflict |
Gly 122 | - | expression tag |
Ser 123 | - | expression tag |
His 124 | - | expression tag |
His 125 | - | expression tag |
His 126 | - | expression tag |
His 127 | - | expression tag |
His 128 | - | expression tag |
His 129 | - | expression tag |
His 130 | - | expression tag |
His 131 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 124973.2 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1149.2 | |
All* | Total formula weight | 126122.4 |