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8ZCA

Crystal structure of human CD47 ECD bound to Fab of Hu1C8

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, B)
1C8 Fab light chainpolymer21823801.32Homo sapiens (human)
2B, D
(D, C)
1C8 Fab heavy chainpolymer22523760.62Homo sapiens (human)
3E, F
(E, F)
Leukocyte surface antigen CD47polymer13114924.72UniProt (Q08722)
Pfam (PF08204)
Homo sapiens (human)Antigenic surface determinant protein OA3,Integrin-associated protein,IAP,Protein MER6
4G, I
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
5H, J
(D, C)
GLYCEROLnon-polymer92.12Chemie (GOL)
6K, L, M, N
(E, F)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)
7O, P, Q, R, S...
(A, D, B, C, E...)
waterwater18.0170Chemie (HOH)
Sequence modifications
E, F: 1 - 121 (UniProt: Q08722)
PDBExternal DatabaseDetails
Gly 15Cys 33conflict
Gly 122-expression tag
Ser 123-expression tag
His 124-expression tag
His 125-expression tag
His 126-expression tag
His 127-expression tag
His 128-expression tag
His 129-expression tag
His 130-expression tag
His 131-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight124973.2
Non-Polymers*Number of molecules8
Total formula weight1149.2
All*Total formula weight126122.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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