8YP6
Cryo-EM map of 30S ribosomal subunit in complex with MetAP1c of Mycobacterium smegmatis
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (a) | 16S rRNA | polymer | 1510 | 489828.6 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 2 | B (c) | Small ribosomal subunit protein uS3 | polymer | 210 | 23805.4 | 1 | UniProt (A0QSD7) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (P9WH37) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S3 |
| 3 | C (d) | Small ribosomal subunit protein uS4 | polymer | 200 | 23284.6 | 1 | UniProt (A0QSL7) Pfam (PF00163) Pfam (PF01479) UniProt (by SIFTS) (P9WH35) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S4 |
| 4 | D (e) | Small ribosomal subunit protein uS5 | polymer | 198 | 20443.5 | 1 | UniProt (A0QSG6) Pfam (PF00333) Pfam (PF03719) UniProt (by SIFTS) (P9WH33) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S5 |
| 5 | E (f) | Small ribosomal subunit protein bS6 | polymer | 96 | 10991.6 | 1 | UniProt (A0A2U9Q0X2) Pfam (PF01250) UniProt (by SIFTS) (P9WH31) | Mycolicibacterium smegmatis MC2 155 | |
| 6 | F (g) | 30S ribosomal protein S7 | polymer | 156 | 17660.4 | 1 | UniProt (A0QS97) Pfam (PF00177) UniProt (by SIFTS) (P9WH29) | Mycolicibacterium smegmatis MC2 155 | |
| 7 | G (h) | Small ribosomal subunit protein uS8 | polymer | 130 | 14260.3 | 1 | UniProt (A0QSG3) Pfam (PF00410) UniProt (by SIFTS) (P9WH27) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S8 |
| 8 | H (i) | Small ribosomal subunit protein uS9 | polymer | 126 | 14093.4 | 1 | UniProt (A0QSP9) Pfam (PF00380) UniProt (by SIFTS) (P9WH25) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S9 |
| 9 | I (j) | Small ribosomal subunit protein uS10 | polymer | 97 | 11066.9 | 1 | UniProt (A0QSD0) Pfam (PF00338) UniProt (by SIFTS) (P9WH67) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S10 |
| 10 | J (k) | Small ribosomal subunit protein uS11 | polymer | 117 | 12380.0 | 1 | UniProt (A0QSL6) Pfam (PF00411) UniProt (by SIFTS) (P9WH65) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S11 |
| 11 | K (l) | Small ribosomal subunit protein uS12 | polymer | 122 | 13678.1 | 1 | UniProt (A0QS96) Pfam (PF00164) UniProt (by SIFTS) (P9WH63) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S12 |
| 12 | L (n) | Small ribosomal subunit protein uS14B | polymer | 60 | 6845.2 | 1 | UniProt (A0QSG2) Pfam (PF00253) UniProt (by SIFTS) (P9WH57) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S14 type Z |
| 13 | M (o) | Small ribosomal subunit protein uS15 | polymer | 87 | 10079.7 | 1 | UniProt (A0QVQ3) Pfam (PF00312) UniProt (by SIFTS) (P9WH55) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S15 |
| 14 | N (p) | Small ribosomal subunit protein bS16 | polymer | 113 | 12635.7 | 1 | UniProt (A0QV37) Pfam (PF00886) UniProt (by SIFTS) (P9WH53) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S16 |
| 15 | O (q) | Small ribosomal subunit protein uS17 | polymer | 92 | 10423.2 | 1 | UniProt (A0QSE0) Pfam (PF00366) UniProt (by SIFTS) (P9WH51) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S17 |
| 16 | P (r) | Small ribosomal subunit protein bS18B | polymer | 64 | 7338.6 | 1 | UniProt (A0R7F7) Pfam (PF01084) UniProt (by SIFTS) (P9WH49) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S18 2 |
| 17 | Q (t) | Small ribosomal subunit protein bS20 | polymer | 84 | 9353.8 | 1 | UniProt (A0R102) Pfam (PF01649) UniProt (by SIFTS) (P9WH41) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S20 |
| 18 | R (s) | Small ribosomal subunit protein uS19 | polymer | 80 | 9167.7 | 1 | UniProt (A0QSD5) Pfam (PF00203) UniProt (by SIFTS) (P9WH45) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S19 |
| 19 | S (A) | Methionine aminopeptidase | polymer | 296 | 32354.4 | 1 | UniProt (I7FJS2) Pfam (PF00557) UniProt (by SIFTS) (P9WK19) | Mycolicibacterium smegmatis MC2 155 | MAP,MetAP,Peptidase M |
| 20 | T (m) | Small ribosomal subunit protein uS13 | polymer | 117 | 13445.6 | 1 | UniProt (A0QSL5) Pfam (PF00416) UniProt (by SIFTS) (P9WH61) | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S13 |
Sequence modifications
A: 1 - 285 (UniProt: I7FJS2)
| PDB | External Database | Details |
|---|---|---|
| Ala 286 | - | expression tag |
| Ala 287 | - | expression tag |
| Ala 288 | - | expression tag |
| Leu 289 | - | expression tag |
| Gln 290 | - | expression tag |
| His 291 | - | expression tag |
| His 292 | - | expression tag |
| His 293 | - | expression tag |
| His 294 | - | expression tag |
| His 295 | - | expression tag |
| His 296 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 20 |
| Total formula weight | 763136.6 | |
| All* | Total formula weight | 763136.6 |
