8W6P
Crystal structure of dimeric murine SMPDL3A
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Acid sphingomyelinase-like phosphodiesterase 3a | polymer | 413 | 46664.6 | 2 | UniProt (P70158) Pfam (PF00149) Pfam (PF19272) | Mus musculus (house mouse) | ASM-like phosphodiesterase 3a |
| 2 | C, E (C, E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 3 | D (D) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
| 4 | F (F) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 5 | G (A) | [(2~{R},3~{S},4~{S})-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphinic acid | non-polymer | 230.2 | 1 | Chemie (YA4) | |||
| 6 | H, I, L, N, O... (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 7 | J, K, R, S (A, B) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 8 | M (B) | alpha-L-fucopyranose | non-polymer | 164.2 | 1 | Chemie (FUC) | |||
| 9 | Q (B) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 10 | T, U (A, B) | water | water | 18.0 | 804 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 93329.2 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1802.7 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 2078.2 | |
| All* | Total formula weight | 97210.1 |
