8W6P
Crystal structure of dimeric murine SMPDL3A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-16 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.5418 |
Spacegroup name | P 41 |
Unit cell lengths | 122.225, 122.225, 79.557 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.270 - 1.910 |
R-factor | 0.2182 |
Rwork | 0.218 |
R-free | 0.24620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.261 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.270 | 1.940 |
High resolution limit [Å] | 1.910 | 1.910 |
Rmerge | 0.101 | 0.768 |
Number of reflections | 89995 | 3909 |
<I/σ(I)> | 17.9 | 1 |
Completeness [%] | 98.6 | 85.1 |
Redundancy | 7.5 | 3.5 |
CC(1/2) | 0.999 | 0.597 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 0.1 M sodium citrate [pH 5.5], 0.2M ammonium sulfate and 30% PEG 4000 |