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8T5B

HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor EKC-110

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Integrasepolymer15517011.52UniProt (P12497)
Pfam (PF00665)
Human immunodeficiency virus 1IN
2C, D
(C, D)
Integrasepolymer576574.62UniProt (P12497)
Pfam (PF00552)
Human immunodeficiency virus 1IN
3E, G
(A, B)
(2S)-tert-butoxy{4-(4-chlorophenyl)-2,6-dimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acidnon-polymer481.02Chemie (QD6)
4F, H
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5I, J, K, L
(A, B, C, D)
waterwater18.082Chemie (HOH)
Sequence modifications
A, B: 57 - 211 (UniProt: P12497)
PDBExternal DatabaseDetails
Lys 185Phe 1332conflict
C, D: 221 - 277 (UniProt: P12497)
PDBExternal DatabaseDetails
Glu 243Trp 1390conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47172.2
Non-Polymers*Number of molecules4
Total formula weight1010.6
All*Total formula weight48182.7
*Water molecules are not included.

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PDB entries from 2025-06-18

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