8T5B
HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor EKC-110
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 4.2.2 |
| Synchrotron site | ALS |
| Beamline | 4.2.2 |
| Temperature [K] | 100 |
| Detector technology | CMOS |
| Collection date | 2022-09-16 |
| Detector | RDI CMOS_8M |
| Wavelength(s) | 0.9774 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 61.954, 69.984, 63.858 |
| Unit cell angles | 90.00, 100.73, 90.00 |
Refinement procedure
| Resolution | 46.720 - 2.080 |
| R-factor | 0.2416 |
| Rwork | 0.240 |
| R-free | 0.26470 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 8a1q |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.603 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.720 | 2.154 |
| High resolution limit [Å] | 2.080 | 2.080 |
| Rmerge | 0.069 | 0.996 |
| Rmeas | 0.098 | 1.408 |
| Rpim | 0.069 | 0.996 |
| Number of reflections | 31574 | 2807 |
| <I/σ(I)> | 6.22 | 0.52 |
| Completeness [%] | 97.2 | 84.72 |
| Redundancy | 1.9 | |
| CC(1/2) | 0.997 | 0.320 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 10% (wt/vol) PEG 8,000, 20% ethylene glycol, 30 mM MgCl2, 30 mM CaCl2, and 0.1 M imidazole-MES (pH 6.5) |






