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8JPX

Cryo-EM structure of PfAgo-guide DNA-target DNA complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(B, A)
Protein argonautepolymer77090510.12UniProt (Q8U3D2)
Pfam (PF22476)
Pfam (PF12212)
Pfam (PF02171)
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)PfAgo
2B, E
(H, G)
Guide DNApolymer175337.52Pyrococcus furiosus DSM 3638
3C, F
(U, T)
Target DNApolymer175075.32Pyrococcus furiosus DSM 3638
4G, H
(E, F)
Excess DNApolymer61780.22Pyrococcus furiosus DSM 3638
5I, J, K, L, M...
(B, H, A, G)
MAGNESIUM IONnon-polymer24.36Chemie (MG)
Sequence modifications
B, A: 1 - 770 (UniProt: Q8U3D2)
PDBExternal DatabaseDetails
Ile 4Lys 4conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight205406.2
Non-Polymers*Number of molecules6
Total formula weight145.8
All*Total formula weight205552.0
*Water molecules are not included.

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PDB entries from 2024-11-13

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