8J9H
Cryo-EM structure of Euglena gracilis respiratory complex I, deactive state
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 1A | NDUS1A | polymer | 385 | 43888.8 | 1 | Euglena gracilis | ||
| 2 | 1B | NDUS1B | polymer | 527 | 59671.8 | 1 | Euglena gracilis | ||
| 3 | 2B | NADH dehydrogenase subunit 5 | polymer | 142 | 15756.8 | 1 | Euglena gracilis | ||
| 4 | 4L | ND4L | polymer | 171 | 19673.1 | 1 | Euglena gracilis | ||
| 5 | A1 | NDUFA1 | polymer | 141 | 15659.6 | 1 | Euglena gracilis | ||
| 6 | A2 | NDUFA2 | polymer | 193 | 21331.2 | 1 | Euglena gracilis | ||
| 7 | A3 | NDUFA3 | polymer | 125 | 14950.3 | 1 | Euglena gracilis | ||
| 8 | A5 | NDUFA5 | polymer | 184 | 20961.9 | 1 | Euglena gracilis | ||
| 9 | A6 | NDUFA6 | polymer | 437 | 48787.0 | 1 | Euglena gracilis | ||
| 10 | A7 | NDUFA7 | polymer | 136 | 16358.7 | 1 | Euglena gracilis | ||
| 11 | A8 | NDUFA8 | polymer | 223 | 25916.3 | 1 | Euglena gracilis | ||
| 12 | A9 | NDUFA9 | polymer | 489 | 54983.1 | 1 | Euglena gracilis | ||
| 13 | AB | NDUFAB1-alpha | polymer | 134 | 14936.1 | 1 | Euglena gracilis | ||
| 14 | AL | NDUFA12 | polymer | 281 | 33338.1 | 1 | Euglena gracilis | ||
| 15 | AM | NDUFA13 | polymer | 198 | 22683.8 | 1 | Euglena gracilis | ||
| 16 | AN | NDUFA11 | polymer | 287 | 32617.5 | 1 | Euglena gracilis | ||
| 17 | B2 | NDUFB2 | polymer | 145 | 17202.4 | 1 | Euglena gracilis | ||
| 18 | B3 | NDUFB3 | polymer | 62 | 6831.1 | 1 | Euglena gracilis | ||
| 19 | B4 | NDUFB4 | polymer | 171 | 19511.4 | 1 | Euglena gracilis | ||
| 20 | B5 | NDUFB5 | polymer | 140 | 15815.0 | 1 | Euglena gracilis | ||
| 21 | B6 | NDUFB6 | polymer | 91 | 10926.6 | 1 | Euglena gracilis | ||
| 22 | B7 | NDUFB7 | polymer | 97 | 12247.1 | 1 | Euglena gracilis | ||
| 23 | B8 | NDUFB8 | polymer | 176 | 20488.5 | 1 | Euglena gracilis | ||
| 24 | B9 | NDUFB9 | polymer | 158 | 18347.0 | 1 | Euglena gracilis | ||
| 25 | BL | NDUFB10 | polymer | 144 | 17471.0 | 1 | Euglena gracilis | ||
| 26 | BM | NDUFB11 | polymer | 112 | 13048.7 | 1 | Euglena gracilis | ||
| 27 | C4 | NDUFC2 | polymer | 185 | 22010.1 | 1 | Euglena gracilis | ||
| 28 | E1 | NDUEG1 | polymer | 483 | 53352.0 | 1 | Euglena gracilis | ||
| 29 | E2 | NDUEG2 | polymer | 467 | 50515.3 | 1 | Euglena gracilis | ||
| 30 | E3 | NDUEG3 | polymer | 434 | 46409.8 | 1 | Euglena gracilis | ||
| 31 | E4 | NDUEG4 | polymer | 368 | 41313.4 | 1 | Euglena gracilis | ||
| 32 | E5 | NDUEG5 | polymer | 290 | 29182.7 | 1 | Euglena gracilis | ||
| 33 | E6 | NDUEG6 | polymer | 371 | 43669.5 | 1 | Euglena gracilis | ||
| 34 | E8 | NDUEG8 | polymer | 205 | 23994.7 | 1 | Euglena gracilis | ||
| 35 | EA | NDUEG10 | polymer | 126 | 14140.6 | 1 | Euglena gracilis | ||
| 36 | EB | NDUEG11 | polymer | 101 | 11472.2 | 1 | Euglena gracilis | ||
| 37 | EC | NDUEG12 | polymer | 101 | 11323.1 | 1 | Euglena gracilis | ||
| 38 | ED | NDUEG13 | polymer | 151 | 17731.4 | 1 | Euglena gracilis | ||
| 39 | FX | NDUFX | polymer | 325 | 37197.0 | 1 | Euglena gracilis | ||
| 40 | G1 | NDUCA1 | polymer | 436 | 48726.9 | 1 | Euglena gracilis | ||
| 41 | G2 | NDUCA2 | polymer | 267 | 28858.0 | 1 | Euglena gracilis | ||
| 42 | G3 | NDUCA3 | polymer | 261 | 28016.9 | 1 | Euglena gracilis | ||
| 43 | N1 | ND1 | polymer | 670 | 79682.8 | 1 | Euglena gracilis | ||
| 44 | N2 | ND2A | polymer | 300 | 35864.4 | 1 | Euglena gracilis | ||
| 45 | N3, N6 | ND3 | polymer | 293 | 34504.2 | 2 | Euglena gracilis | ||
| 46 | N4 | NADH-ubiquinone oxidoreductase chain 4 | polymer | 478 | 56417.3 | 1 | UniProt (A0A0S2YRV6) Pfam (PF00361) In PDB | Euglena gracilis | |
| 47 | N5 | ND5 | polymer | 584 | 68375.4 | 1 | Euglena gracilis | ||
| 48 | S2 | NDUFS2 | polymer | 395 | 45251.9 | 1 | Euglena gracilis | ||
| 49 | S3 | NDUFS3 | polymer | 277 | 32466.7 | 1 | Euglena gracilis | ||
| 50 | S4 | NDUFS4 | polymer | 208 | 23736.9 | 1 | Euglena gracilis | ||
| 51 | S5 | NDUFS5 | polymer | 122 | 14244.0 | 1 | Euglena gracilis | ||
| 52 | S6 | NDUFS6 | polymer | 147 | 17101.7 | 1 | Euglena gracilis | ||
| 53 | S7 | NDUFS7 | polymer | 207 | 22837.3 | 1 | Euglena gracilis | ||
| 54 | S8 | NDUFS8 | polymer | 212 | 24370.0 | 1 | Euglena gracilis | ||
| 55 | U1, U2 | UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK-UNK | polymer | 12 | 1039.3 | 2 | Euglena gracilis | ||
| 56 | V1 | NDUFV1 | polymer | 526 | 57940.2 | 1 | Euglena gracilis | ||
| 57 | V2 | NDUFV2 | polymer | 225 | 25189.1 | 1 | Euglena gracilis | ||
| 58 | E7 | NDUEG7 | polymer | 246 | 26818.8 | 1 | Euglena gracilis | ||
| 59 | AC | NDUFAB1-beta | polymer | 134 | 14899.1 | 1 | Euglena gracilis | ||
| 60 | 1A, V2 | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) | |||
| 61 | 1A, S7, S8, V1 | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 6 | Chemie (SF4) | |||
| 62 | 1A | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 63 | AM, N4, AN, N5, B5... | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 26 | Chemie (PC1) | |||
| 64 | AM, N4, B3, B5, N5... | CARDIOLIPIN | non-polymer | 1464.0 | 18 | Chemie (CDL) | |||
| 65 | A9 | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 1 | Chemie (NDP) | |||
| 66 | AB, AC | S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate | non-polymer | 568.7 | 2 | Chemie (ZMP) | |||
| 67 | N4, AN, N5, G1 | 1,2-Distearoyl-sn-glycerophosphoethanolamine | non-polymer | 748.1 | 4 | Chemie (3PE) | |||
| 68 | N4 | UBIQUINONE-10 | non-polymer | 863.3 | 1 | Chemie (U10) | |||
| 69 | S6, E7 | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 70 | V1 | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 1 | Chemie (FMN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 61 |
| Total formula weight | 1737599.1 | |
| Non-Polymers* | Number of molecules | 64 |
| Total formula weight | 55722.7 | |
| All* | Total formula weight | 1793321.8 |
