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8IP9

Wheat 40S ribosome in complex with a tRNAi

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1aa18S ribosomal RNApolymer1810583613.61GenBank (2123606567)Triticum aestivum (bread wheat)
2ba40S ribosomal protein eS24polymer13715739.71UniProt (A0A3B6PK86)
Pfam (PF01282)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S24
3ca40S ribosomal protein eS8polymer22525341.11UniProt (A0A3B6AYT7)
Pfam (PF01201)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S8
4da40S ribosomal protein eS10polymer18820464.01UniProt (W5AUH7)
Pfam (PF03501)
In PDB
Triticum aestivum (bread wheat)Plectin/S10 N-terminal domain-containing protein
5ga40S ribosomal protein S23polymer14215696.51UniProt (W5FV77)
Pfam (PF00164)
In PDB
Triticum aestivum (bread wheat)
6haRACK1polymer33236200.51UniProt (W5D4F5)
Pfam (PF00400)
In PDB
Triticum aestivum (bread wheat)Plectin/S10 N-terminal domain-containing protein
7ia40S ribosomal protein uS3polymer22725413.81UniProt (Q8L804)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Triticum aestivum (bread wheat)Putative 40S ribosomal protein S3
8ja40S ribosomal protein eS4polymer26530008.11UniProt (A0A1D5SLI4)
Pfam (PF08071)
Pfam (PF01479)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S4
9ka40S ribosomal protein uS7polymer20022350.91UniProt (W5D067)
Pfam (PF00177)
In PDB
Triticum aestivum (bread wheat)Ribosomal protein S7 domain-containing protein
10la40S ribosomal protein uS9polymer14916871.01UniProt (A0A3B6HX49)
Pfam (PF00380)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S16
11ma40S ribosomal protein uS10polymer12714128.41UniProt (U5HTD8)
Pfam (PF00338)
In PDB
Triticum aestivum (bread wheat)Ribosomal protein S20
12na40S ribosomal protein uS11polymer15116398.81UniProt (A0A3B6SS17)
Pfam (PF00411)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S14
13oa40S ribosomal protein uS13polymer15217702.71UniProt (Q8L806)
Pfam (PF00416)
In PDB
Triticum aestivum (bread wheat)Putative ribosomal protein S18
14pa40S ribosomal protein uS15polymer15117102.31UniProt (Q5XUU9)
Pfam (PF08069)
Pfam (PF00312)
In PDB
Triticum aestivum (bread wheat)Cytoplasmatic ribosomal protein S13
15qa40S ribosomal protein eS17polymer14316523.11UniProt (A0A3B5YWZ3)
Pfam (PF00833)
In PDB
Triticum aestivum (bread wheat)
16ra40S ribosomal protein eS19polymer15517097.61UniProt (W5FWF5)
Pfam (PF01090)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S19
17sa40S ribosomal protein uS19polymer15417424.61UniProt (W5ASA4)
Pfam (PF00203)
In PDB
Triticum aestivum (bread wheat)Genome assembly, chromosome: II
18ta40S ribosomal protein eS25polymer10812094.21UniProt (W5EP45)
Pfam (PF03297)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S25
19ua40S ribosomal protein eS28polymer869815.31UniProt (Q7X9K4)
Pfam (PF01200)
In PDB
Triticum aestivum (bread wheat)S28 ribosomal protein
20va40S ribosomal protein uS8polymer12914924.31UniProt (A0A077RZD1)
Pfam (PF00410)
In PDB
Triticum aestivum (bread wheat)30S ribosomal protein S8, chloroplastic
21wa40S ribosomal protein uS14polymer566391.51UniProt (A0A3B6LU46)
Pfam (PF00253)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S29
22xa40S ribosomal protein eS27polymer869583.21UniProt (W5HZ68)
Pfam (PF01667)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S27
23ya40S ribosomal protein eS30polymer626934.21UniProt (A0A3B6S9M7)
Pfam (PF04758)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S30
24za40S ribosomal protein uS2polymer30833300.41UniProt (W5E2W7)
Pfam (PF00318)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein SA
25bb40S ribosomal protein eS1polymer26330044.01UniProt (A0A3B6IU74)
Pfam (PF01015)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S3a
26cb40S ribosomal protein eS21polymer829194.31UniProt (W5EL62)
Pfam (PF01249)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S21
27db40S ribosomal protein eS26polymer15616576.21UniProt (A0A3B6LWE1)
Pfam (PF01283)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S26
28eb40S ribosomal protein uS4polymer19522534.11UniProt (W5FPA7)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Triticum aestivum (bread wheat)30S ribosomal protein S4, chloroplastic
29fb40S ribosomal protein uS5polymer27429996.01UniProt (A0A3B6LVN2)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Triticum aestivum (bread wheat)S5 DRBM domain-containing protein
30gb40S ribosomal protein eS6polymer25028488.61UniProt (A0A2X0SLI3)
Pfam (PF01092)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S6
31hb40S ribosomal protein eS7polymer19222297.91UniProt (Q5I7K2)
Pfam (PF01251)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S7
32ib40S ribosomal protein uS17polymer15917841.11UniProt (W5BFB7)
Pfam (PF16205)
Pfam (PF00366)
In PDB
Triticum aestivum (bread wheat)40S ribosomal protein S11 N-terminal domain-containing protein
33IB60S ribosomal protein eL41polymer253445.41UniProt (P62125)
Pfam (PF05162)
In PDB
Oryza sativa (rice)60S ribosomal protein L41
34almRNApolymer72229.41Triticum aestivum (wheat)
35cltRNAipolymer7524446.91Triticum aestivum (wheat)
36aa, ja, al, clMAGNESIUM IONnon-polymer24.384Chemie (MG)
37wa, dbZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
aa: 1 - 1810 (GenBank: 2123606567)
PDBExternal DatabaseDetails
-G 1183deletion
G 1399C 1400conflict
C 1411G 1412conflict
C 1441G 1442conflict
C 1762G 1763conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains35
Total formula weight1208213.6
Non-Polymers*Number of molecules86
Total formula weight2172.4
All*Total formula weight1210386.0
*Water molecules are not included.

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PDB entries from 2024-05-15

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