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8IP9

Wheat 40S ribosome in complex with a tRNAi

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(aa)
18S ribosomal RNApolymer1810583613.61GenBank (2123606567)Triticum aestivum (bread wheat)
2B
(ba)
40S ribosomal protein eS24polymer13715739.71UniProt (A0A3B6PK86)
Pfam (PF01282)
Triticum aestivum (bread wheat)40S ribosomal protein S24
3C
(ca)
40S ribosomal protein eS8polymer22525341.11UniProt (A0A3B6AYT7)
Pfam (PF01201)
Triticum aestivum (bread wheat)40S ribosomal protein S8
4D
(da)
40S ribosomal protein eS10polymer18820464.01UniProt (W5AUH7)
Pfam (PF03501)
Triticum aestivum (bread wheat)Plectin/S10 N-terminal domain-containing protein
5E
(ga)
40S ribosomal protein S23polymer14215696.51UniProt (W5FV77)
Pfam (PF00164)
Triticum aestivum (bread wheat)
6F
(ha)
RACK1polymer33236200.51UniProt (W5D4F5)
Pfam (PF00400)
Triticum aestivum (bread wheat)Plectin/S10 N-terminal domain-containing protein
7G
(ia)
40S ribosomal protein uS3polymer22725413.81UniProt (Q8L804)
Pfam (PF07650)
Pfam (PF00189)
Triticum aestivum (bread wheat)Putative 40S ribosomal protein S3
8H
(ja)
40S ribosomal protein eS4polymer26530008.11UniProt (A0A1D5SLI4)
Pfam (PF08071)
Pfam (PF01479)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
Triticum aestivum (bread wheat)40S ribosomal protein S4
9I
(ka)
40S ribosomal protein uS7polymer20022350.91UniProt (W5D067)
UniProt (by SIFTS) (A0A9R1JSD6)
Triticum aestivum (bread wheat)Ribosomal protein S7 domain-containing protein
10J
(la)
40S ribosomal protein uS9polymer14916871.01UniProt (A0A3B6HX49)
Pfam (PF00380)
Triticum aestivum (bread wheat)40S ribosomal protein S16
11K
(ma)
40S ribosomal protein uS10polymer12714128.41UniProt (U5HTD8)
Pfam (PF00338)
Triticum aestivum (bread wheat)Ribosomal protein S20
12L
(na)
40S ribosomal protein uS11polymer15116398.81UniProt (A0A3B6SS17)
Pfam (PF00411)
Triticum aestivum (bread wheat)40S ribosomal protein S14
13M
(oa)
40S ribosomal protein uS13polymer15217702.71UniProt (Q8L806)
Pfam (PF00416)
Triticum aestivum (bread wheat)Putative ribosomal protein S18
14N
(pa)
40S ribosomal protein uS15polymer15117102.31UniProt (Q5XUU9)
Pfam (PF08069)
Pfam (PF00312)
Triticum aestivum (bread wheat)Cytoplasmatic ribosomal protein S13
15O
(qa)
40S ribosomal protein eS17polymer14316523.11UniProt (A0A3B5YWZ3)
Pfam (PF00833)
Triticum aestivum (bread wheat)
16P
(ra)
40S ribosomal protein eS19polymer15517097.61UniProt (W5FWF5)
Pfam (PF01090)
Triticum aestivum (bread wheat)40S ribosomal protein S19
17Q
(sa)
40S ribosomal protein uS19polymer15417424.61UniProt (W5ASA4)
Pfam (PF00203)
Triticum aestivum (bread wheat)Genome assembly, chromosome: II
18R
(ta)
40S ribosomal protein eS25polymer10812094.21UniProt (W5EP45)
Pfam (PF03297)
Triticum aestivum (bread wheat)40S ribosomal protein S25
19S
(ua)
40S ribosomal protein eS28polymer869815.31UniProt (Q7X9K4)
Pfam (PF01200)
Triticum aestivum (bread wheat)S28 ribosomal protein
20T
(va)
40S ribosomal protein uS8polymer12914924.31UniProt (A0A077RZD1)
Pfam (PF00410)
Triticum aestivum (bread wheat)30S ribosomal protein S8, chloroplastic
21U
(wa)
40S ribosomal protein uS14polymer566391.51UniProt (A0A3B6LU46)
Pfam (PF00253)
UniProt (by SIFTS) (Q5I7K3)
Triticum aestivum (bread wheat)40S ribosomal protein S29
22V
(xa)
40S ribosomal protein eS27polymer869583.21UniProt (W5HZ68)
Pfam (PF01667)
Triticum aestivum (bread wheat)40S ribosomal protein S27
23W
(ya)
40S ribosomal protein eS30polymer626934.21UniProt (A0A3B6S9M7)
Pfam (PF04758)
Triticum aestivum (bread wheat)40S ribosomal protein S30
24X
(za)
40S ribosomal protein uS2polymer30833300.41UniProt (W5E2W7)
Pfam (PF00318)
Triticum aestivum (bread wheat)40S ribosomal protein SA
25Y
(bb)
40S ribosomal protein eS1polymer26330044.01UniProt (A0A3B6IU74)
Pfam (PF01015)
Triticum aestivum (bread wheat)40S ribosomal protein S3a
26Z
(cb)
40S ribosomal protein eS21polymer829194.31UniProt (W5EL62)
Pfam (PF01249)
Triticum aestivum (bread wheat)40S ribosomal protein S21
27AA
(db)
40S ribosomal protein eS26polymer15616576.21UniProt (A0A3B6LWE1)
Pfam (PF01283)
Triticum aestivum (bread wheat)40S ribosomal protein S26
28BA
(eb)
40S ribosomal protein uS4polymer19522534.11UniProt (W5FPA7)
Pfam (PF00163)
Pfam (PF01479)
Triticum aestivum (bread wheat)30S ribosomal protein S4, chloroplastic
29CA
(fb)
40S ribosomal protein uS5polymer27429996.01UniProt (A0A3B6LVN2)
Pfam (PF00333)
Pfam (PF03719)
Triticum aestivum (bread wheat)S5 DRBM domain-containing protein
30DA
(gb)
40S ribosomal protein eS6polymer25028488.61UniProt (A0A2X0SLI3)
Pfam (PF01092)
Triticum aestivum (bread wheat)40S ribosomal protein S6
31EA
(hb)
40S ribosomal protein eS7polymer19222297.91UniProt (Q5I7K2)
Pfam (PF01251)
Triticum aestivum (bread wheat)40S ribosomal protein S7
32FA
(ib)
40S ribosomal protein uS17polymer15917841.11UniProt (W5BFB7)
Pfam (PF16205)
Pfam (PF00366)
Triticum aestivum (bread wheat)40S ribosomal protein S11 N-terminal domain-containing protein
33GA
(IB)
60S ribosomal protein eL41polymer253445.41UniProt (P62125)
Pfam (PF05162)
Oryza sativa (rice)60S ribosomal protein L41
34HA
(al)
mRNApolymer72229.41Triticum aestivum (wheat)
35IA
(cl)
tRNAipolymer7524446.91Triticum aestivum (wheat)
36AB, AC, AD, BB, BC...
(aa, ja, al, cl)
MAGNESIUM IONnon-polymer24.384Chemie (MG)
37MD, ND
(wa, db)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
aa: 1 - 1810 (GenBank: 2123606567)
PDBExternal DatabaseDetails
-G 1183deletion
G 1399C 1400conflict
C 1411G 1412conflict
C 1441G 1442conflict
C 1762G 1763conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains35
Total formula weight1208213.6
Non-Polymers*Number of molecules86
Total formula weight2172.4
All*Total formula weight1210386.0
*Water molecules are not included.

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PDB entries from 2025-07-16

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