8G1P
Co-crystal structure of Compound 11 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | Elongin-B | polymer | 118 | 13147.8 | 2 | UniProt (Q15370) Pfam (PF00240) In PDB | Homo sapiens (human) | EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2 |
2 | B, E | Elongin-C | polymer | 112 | 12485.1 | 2 | UniProt (Q15369) Pfam (PF03931) In PDB | Homo sapiens (human) | EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1 |
3 | C, F | von Hippel-Lindau disease tumor suppressor | polymer | 162 | 18702.3 | 2 | UniProt (P40337) Pfam (PF01847) Pfam (PF17211) In PDB | Homo sapiens (human) | Protein G7,pVHL |
4 | G, H | Probable global transcription activator SNF2L2 | polymer | 123 | 14380.5 | 2 | UniProt (B4DNT1) Pfam (PF00439) UniProt (by SIFTS) (P51531) In PDB | Homo sapiens (human) | cDNA FLJ61143,highly similar to Probable global transcription activator SNF2L2 |
5 | A, H | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
6 | C, F | (2~{S},4~{R})-~{N}-[[2-[2-[4-[[4-[3-azanyl-6-(2-hydroxyphenyl)pyridazin-4-yl]piperazin-1-yl]methyl]phenyl]ethoxy]-4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide | non-polymer | 920.1 | 2 | Chemie (FWZ) | |||
7 | water | water | 18.0 | 193 | Chemie (HOH) |
Sequence modifications
C, F: 56 - 213 (UniProt: P40337)
G, H: 1373 - 1493 (UniProt: B4DNT1)
PDB | External Database | Details |
---|---|---|
Gly 52 | - | expression tag |
Ser 53 | - | expression tag |
Met 54 | - | expression tag |
Glu 55 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 1371 | - | expression tag |
Met 1372 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 117431.5 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 2024.4 | |
All* | Total formula weight | 119455.9 |