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8G1P

Co-crystal structure of Compound 11 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DElongin-Bpolymer11813147.82UniProt (Q15370)
Pfam (PF00240)
In PDB
Homo sapiens (human)EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2
2B, EElongin-Cpolymer11212485.12UniProt (Q15369)
Pfam (PF03931)
In PDB
Homo sapiens (human)EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1
3C, Fvon Hippel-Lindau disease tumor suppressorpolymer16218702.32UniProt (P40337)
Pfam (PF01847)
Pfam (PF17211)
In PDB
Homo sapiens (human)Protein G7,pVHL
4G, HProbable global transcription activator SNF2L2polymer12314380.52UniProt (B4DNT1)
Pfam (PF00439)
UniProt (by SIFTS) (P51531)
In PDB
Homo sapiens (human)cDNA FLJ61143,highly similar to Probable global transcription activator SNF2L2
5A, HGLYCEROLnon-polymer92.12Chemie (GOL)
6C, F(2~{S},4~{R})-~{N}-[[2-[2-[4-[[4-[3-azanyl-6-(2-hydroxyphenyl)pyridazin-4-yl]piperazin-1-yl]methyl]phenyl]ethoxy]-4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamidenon-polymer920.12Chemie (FWZ)
7waterwater18.0193Chemie (HOH)
Sequence modifications
C, F: 56 - 213 (UniProt: P40337)
PDBExternal DatabaseDetails
Gly 52-expression tag
Ser 53-expression tag
Met 54-expression tag
Glu 55-expression tag
G, H: 1373 - 1493 (UniProt: B4DNT1)
PDBExternal DatabaseDetails
Ser 1371-expression tag
Met 1372-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight117431.5
Non-Polymers*Number of molecules4
Total formula weight2024.4
All*Total formula weight119455.9
*Water molecules are not included.

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PDB entries from 2024-07-10

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