8EDF
Bovine Fab SKD in complex with Sars COV-2 receptor binding domain
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | L | SKD Fab Light chain | polymer | 216 | 22527.6 | 1 | UniProt (P0DOY2) Pfam (PF07654) In PDB | Bos taurus (cattle) | |
2 | H | SKD Fab heavy chain | polymer | 272 | 28454.8 | 1 | UniProt (P0DOX5) Pfam (PF07686) Pfam (PF07654) In PDB | Bos taurus (cattle) | |
3 | A | Spike protein S1 | polymer | 200 | 22601.3 | 1 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
4 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
L: 1 - 121 (PDB: 8EDF)
L: 122 - 212 (UniProt: P0DOY2)
H: 1 - 160 (PDB: 8EDF)
H: 161 - 270 (UniProt: P0DOX5)
A: 334 - 527 (UniProt: P0DTC2)
L: 122 - 212 (UniProt: P0DOY2)
H: 1 - 160 (PDB: 8EDF)
H: 161 - 270 (UniProt: P0DOX5)
A: 334 - 527 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
His 528 | - | expression tag |
His 529 | - | expression tag |
His 530 | - | expression tag |
His 531 | - | expression tag |
His 532 | - | expression tag |
His 533 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 73583.7 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 221.2 | |
All* | Total formula weight | 73804.9 |