8D2M
Covalent Schiff base complex of YedK C2A and abasic DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, B) | Abasic site processing protein YedK | polymer | 227 | 25574.8 | 2 | UniProt (P76318) Pfam (PF02586) | Escherichia coli | |
| 2 | B, D (C, D) | DNA (5'-D(*GP*TP*CP*(PED)P*GP*GP*A)-3') | polymer | 7 | 2031.4 | 2 | synthetic construct | ||
| 3 | E, F, G, H (A, C, B, D) | water | water | 18.0 | 160 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 222 (UniProt: P76318)
| PDB | External Database | Details |
|---|---|---|
| Ala 2 | Cys 2 | engineered mutation |
| Leu 223 | - | expression tag |
| Glu 224 | - | expression tag |
| Val 225 | - | expression tag |
| Leu 226 | - | expression tag |
| Phe 227 | - | expression tag |
| Gln 228 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 55212.4 | |
| All* | Total formula weight | 55212.4 |
