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Cryo-EM structure of NHEJ supercomplex(trimer)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1K, L, N, ODNA repair protein XRCC4polymer33638337.74UniProt (Q13426)
Pfam (PF06632)
Pfam (PF21924)
Pfam (PF21925)
In PDB
Homo sapiens (human)X-ray repair cross-complementing protein 4
2M, PDNA ligase 4polymer911104125.02UniProt (P49917)
Pfam (PF04675)
Pfam (PF01068)
Pfam (PF04679)
Pfam (PF00533)
Pfam (PF11411)
In PDB
Homo sapiens (human)DNA ligase IV,Polydeoxyribonucleotide synthase [ATP] 4
3Q, R, X, YNon-homologous end-joining factor 1polymer29933372.24UniProt (Q9H9Q4)
Pfam (PF09302)
Pfam (PF21928)
In PDB
Homo sapiens (human)Protein cernunnos,XRCC4-like factor
4F, A, SDNA-dependent protein kinase catalytic subunitpolymer4128469673.23UniProt (P78527)
Pfam (PF20502)
Pfam (PF08163)
Pfam (PF19704)
Pfam (PF02259)
Pfam (PF00454)
Pfam (PF02260)
In PDB
Homo sapiens (human)DNA-PK catalytic subunit,DNA-PKcs,DNPK1,p460
5G, B, TX-ray repair cross-complementing protein 6polymer60969945.03UniProt (P12956)
Pfam (PF02037)
Pfam (PF03731)
Pfam (PF02735)
Pfam (PF03730)
In PDB
Homo sapiens (human)5'-deoxyribose-5-phosphate lyase Ku70,5'-dRP lyase Ku70,70 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 1,ATP-dependent DNA helicase II 70 kDa subunit,CTC box-binding factor 75 kDa subunit,CTCBF,DNA repair protein XRCC6,Lupus Ku autoantigen protein p70,Ku70,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 6
6H, C, UX-ray repair cross-complementing protein 5polymer73282812.43UniProt (P13010)
Pfam (PF03731)
Pfam (PF02735)
Pfam (PF03730)
Pfam (PF08785)
In PDB
Homo sapiens (human)86 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 2,ATP-dependent DNA helicase II 80 kDa subunit,CTC box-binding factor 85 kDa subunit,CTCBF,DNA repair protein XRCC5,Ku80,Ku86,Lupus Ku autoantigen protein p86,Nuclear factor IV,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
7I, VDNA (28-MER)polymer288619.62Homo sapiens
8J, WDNA (27-MER)polymer278350.42Homo sapiens
9DDNA (24-MER)polymer247367.81Homo sapiens
10EDNA (24-MER)polymer247402.81Homo sapiens
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains25
Total formula weight2411092.5
All*Total formula weight2411092.5
*Water molecules are not included.

222415

PDB entries from 2024-07-10

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