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7YI2

Cryo-EM structure of Rpd3S in loose-state Rpd3S-NCP complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(G)
Wisdom 601 DNA (167-MER)polymer16751308.71synthetic construct
2B
(H)
Wisdom 601 DNA (167-MER)polymer16751798.01synthetic construct
3C
(A)
Transcriptional regulatory protein SIN3polymer1536175047.31UniProt (P22579)
Pfam (PF02671)
Pfam (PF08295)
Pfam (PF16879)
Saccharomyces cerevisiae S288C (baker's yeast)
4D
(B)
Histone deacetylase RPD3polymer43348962.01UniProt (P32561)
Pfam (PF00850)
Saccharomyces cerevisiae S288C (baker's yeast)
5E
(C)
Chromatin modification-related protein EAF3polymer40145266.41UniProt (Q12432)
Pfam (PF11717)
Pfam (PF22732)
Pfam (PF05712)
Saccharomyces cerevisiae S288C (baker's yeast)ESA1-associated factor 3
6F, G
(D, E)
Transcriptional regulatory protein RCO1polymer68478951.32UniProt (Q04779)
Pfam (PF00628)
Saccharomyces cerevisiae S288C (baker's yeast)
7H, I, J, K, L
(B, D)
ZINC IONnon-polymer65.45Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains7
Total formula weight530284.9
Non-Polymers*Number of molecules5
Total formula weight327.0
All*Total formula weight530612.0
*Water molecules are not included.

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PDB entries from 2025-06-11

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