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7X3P

Crystal structure of human SIRT5 in complex with diazirine inhibitor 9

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NAD-dependent protein deacylase sirtuin-5, mitochondrialpolymer27730183.31UniProt (Q9NXA8)
Pfam (PF02146)
Homo sapiens (human)Regulatory protein SIR2 homolog 5,SIR2-like protein 5
2B
(A)
5-[[(5~{S})-6-[[(1~{S})-1-(4-hydroxyphenyl)-2-oxidanylidene-2-(prop-2-ynylamino)ethyl]amino]-6-oxidanylidene-5-[[4-[3-(trifluoromethyl)-1,2-diazirin-3-yl]phenyl]carbonylamino]hexyl]amino]-5-sulfanylidene-pentanoic acidnon-polymer674.71Chemie (8VG)
3C
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
4D
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
5E
(A)
waterwater18.0391Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight30183.3
Non-Polymers*Number of molecules3
Total formula weight846.2
All*Total formula weight31029.5
*Water molecules are not included.

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PDB entries from 2025-06-25

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