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7X3P

Crystal structure of human SIRT5 in complex with diazirine inhibitor 9

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]198
Detector technologyPIXEL
Collection date2019-11-03
DetectorDECTRIS PILATUS3 X CdTe 1M
Wavelength(s)0.97919
Spacegroup nameP 1 21 1
Unit cell lengths41.332, 65.034, 55.658
Unit cell angles90.00, 93.58, 90.00
Refinement procedure
Resolution27.775 - 1.560
R-factor0.1395
Rwork0.139
R-free0.16340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6eqs
RMSD bond length0.009
RMSD bond angle1.130
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX (1.20.1-4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.5501.656
High resolution limit [Å]1.5601.560
Rmeas0.6760.676
Number of reflections41469
<I/σ(I)>0.1
Completeness [%]96.7
Redundancy1.498
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP28923%-27% (v/v) PEG 3350, 0.1 M MES, pH 5.5-6.0, 0.1-0.2 M NaCl

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